EY685256

Overview
NameEY685256
Unique NameEY685256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12495 contig Csv1_Contig12495:2..660. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_SALTY (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Salmonella typhimurium GN=plsC PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.991e-40
Identity = 80/176 (45.45%), Postives = 106/176 (60.23%), Query Frame = 3
Query:    6 AHKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDREL 533
            A    + + IANHQ+NYD+     +V   TV +GKKSL W+P FGQL+WL GN+LIDR N  KA  ++       +    SIW+FPEGTR+ G  LLPFK GAF  AIAAGVPI+ VCVS    ++ LNR N+G +++  LPP+       D +  L   CR  M   I  +D+E+
Sbjct:   61 AENYGNAIYIANHQNNYDMVTAANIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRAKAHSTIAAVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSNTSNKVNLNRLNNGLVIVEMLPPVDVSEYGKDQVRELAAHCRALMEQKIAELDKEV 236          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_SALTI (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Salmonella typhi GN=plsC PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.991e-40
Identity = 80/176 (45.45%), Postives = 106/176 (60.23%), Query Frame = 3
Query:    6 AHKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDREL 533
            A    + + IANHQ+NYD+     +V   TV +GKKSL W+P FGQL+WL GN+LIDR N  KA  ++       +    SIW+FPEGTR+ G  LLPFK GAF  AIAAGVPI+ VCVS    ++ LNR N+G +++  LPP+       D +  L   CR  M   I  +D+E+
Sbjct:   61 AENYGNAIYIANHQNNYDMVTAANIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRAKAHSTIAAVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSNTSNKVNLNRLNNGLVIVEMLPPVDVSEYGKDQVRELAAHCRALMEQKIAELDKEV 236          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_ECOLI (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Escherichia coli (strain K12) GN=plsC PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.305e-39
Identity = 81/176 (46.02%), Postives = 107/176 (60.80%), Query Frame = 3
Query:    6 AHKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDREL 533
            A    + + IANHQ+NYD+     +V   TV +GKKSL W+P FGQL+WL GN+LIDR N  KA  ++       +    SIW+FPEGTR+ G  LLPFK GAF  AIAAGVPI+ VCVST   ++ LNR ++G +++  LPPI       D +  L   CR  M   I  +D+E+
Sbjct:   61 AESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEV 236          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_HAEIN (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Haemophilus influenzae GN=plsC PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.214e-38
Identity = 75/172 (43.60%), Postives = 105/172 (61.05%), Query Frame = 3
Query:   18 SSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDREL 533
            S  + I NHQ+NYD+     +V  RTV +GKKSL W+P FG L+W+ GN+ +DR N  KA  +M    + +   + SIW+FPEGTRN G  LLPFK GAF  AI+AGVPI+ V  S+   ++ LNRW++G ++   + PI   G T D++  L   C + M   I  +D E+
Sbjct:   65 SRAIYIGNHQNNYDMVTISYMVQPRTVSVGKKSLIWIPFFGILYWVTGNIFLDRENRTKAHNTMSQLARRINEDNLSIWMFPEGTRNRGRGLLPFKTGAFHAAISAGVPIIPVVCSSTHNKINLNRWDNGKVICEIMDPIDVSGYTKDNVRDLAAYCHDLMEKRIAELDEEI 236          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLCA_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Homo sapiens GN=AGPAT1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.231e-31
Identity = 76/170 (44.71%), Postives = 97/170 (57.06%), Query Frame = 3
Query:    3 AAHKPSS--CVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQM 500
            A H P S   V+++NHQS+ DL     V+P R V I K+ L W    G   WLAG + IDR     A   M    QTL   D  +WVFPEGTRN   ++LPFK+GAF +A+ A VPIV + +S+Y      K  R+ SG   +R LPP+PT+GLT DD+P L    R  M
Sbjct:   89 AHHFPPSQPYVVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGQCQVRVLPPVPTEGLTPDDVPALADRVRHSM 258          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLCA_BOVIN (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Bos taurus GN=AGPAT1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.889e-30
Identity = 75/170 (44.12%), Postives = 96/170 (56.47%), Query Frame = 3
Query:    3 AAHKPSS--CVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQM 500
            A H P S   V+++NHQS+ DL     V+P R V I K+ L W    G   WLAG + IDR     A   M    QTL   D  +WVFPEGTRN   ++LPFK+GAF +A+ A VPIV + +S+Y      K  R+ SG   +R LPP+PT+GL  DD+P L    R  M
Sbjct:   89 AHHFPPSQPYVVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLKPDDVPALADRVRHSM 258          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLCA_SHEEP (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Ovis aries GN=AGPAT1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30
Identity = 74/170 (43.53%), Postives = 95/170 (55.88%), Query Frame = 3
Query:    3 AAHKPSS--CVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQM 500
            A H P S   V+++NHQS+ DL     V+P   V I K+ L W    G   WLAG + IDR     A   M    QTL   D  +WVFPEGTRN   ++LPFK+GAF +A+ A VPIV + +S+Y      K  R+ SG   +R LPP+PT+GL  DD+P L    R  M
Sbjct:   89 AHHFPPSQPYVVVSNHQSSLDLLGMMEVLPGHCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLKPDDVPALADRVRHSM 258          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLCA_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Mus musculus GN=Agpat1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29
Identity = 70/161 (43.48%), Postives = 93/161 (57.76%), Query Frame = 3
Query:   27 VIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTY--VKQMKLNRWNS-GDILIRSLPPIPTKGLTMDDMPLLMQTCREQM 500
            V+++NHQS+ DL     V+P R V I K+ L W    G   WLAG + IDR     A   M    QTL   D  +WVFPEGTRN   ++LPFK+GAF +A+ A VPI+ + +S+Y      K  R+ S G   +R LPP+ T+GLT DD+P L  + R  M
Sbjct:   96 VVVSNHQSSLDLLGMMEVLPDRCVPIAKRELLWAGSAGLACWLAGIIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIIPIVMSSYQDFYSKKERRFTSPGRCQVRVLPPVSTEGLTPDDVPALADSVRHSM 256          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLC2_CAEEL (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase acl-2 OS=Caenorhabditis elegans GN=acl-2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.287e-26
Identity = 65/173 (37.57%), Postives = 97/173 (56.07%), Query Frame = 3
Query:   27 VIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVK-QMKLNRW--NSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDRELQ 536
            V+I NHQS+ D+    ++ P   V + K+ L +VP F    + +  + IDR N  +A  S+      +++ +  +WVFPEGTRN     +PFKKGAF +A+ A +PI+ V  S Y     K  R+  N G+++IR L  IPTKGLT+DD+  L   CR+ M    + +  E Q
Sbjct:   93 VVICNHQSSLDILSMASIWPKNCVVMMKRILAYVPFFNLGAYFSNTIFIDRYNRERAMASVDYCASEMKNRNLKLWVFPEGTRNREGGFIPFKKGAFNIAVRAQIPIIPVVFSDYRDFYSKPGRYFKNDGEVVIRVLDAIPTKGLTLDDVSELSDMCRDVMLAAYKEVTLEAQ 265          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLCB_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Homo sapiens GN=AGPAT2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.389e-25
Identity = 66/180 (36.67%), Postives = 95/180 (52.78%), Query Frame = 3
Query:   24 CVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVK--QMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDRELQTAPAITG 557
            CVI++NHQS  D+     V+P R V I K+ L ++   G + +L G   I+R  +  A   M    + +   +  +W++PEGTRN    LLPFKKGAF +A+ A VPIV V  S++      K   + SG + ++ L  IPT GLT  D+P L+ TC   MR     + +  Q   A  G
Sbjct:   92 CVIVSNHQSILDMMGLMEVLPERCVQIAKRELLFLGPVGLIMYLGGVFFINRQRSSTAMTVMADLGERMVRENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIVPVVYSSFSSFYNTKKKFFTSGTVTVQVLEAIPTSGLTAADVPALVDTCHRAMRTTFLHISKTPQENGATAG 271          
The following BLAST results are available for this feature:
BLAST of EY685256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PLSC_SALTY9.991e-4045.451-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_SALTI9.991e-4045.451-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_ECOLI1.305e-3946.021-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_HAEIN3.214e-3843.601-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLCA_HUMAN2.231e-3144.711-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_BOVIN1.889e-3044.121-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_SHEEP7.176e-3043.531-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_MOUSE4.652e-2943.481-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLC2_CAEEL6.287e-2637.57Putative 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
PLCB_HUMAN2.389e-2536.671-acyl-sn-glycerol-3-phosphate acyltransferase bet... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-F12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685256 ID=EY685256; Name=EY685256; organism=Citrus sinensis; type=EST; length=659bp
TCGCTGCGCACAAGCCCAGCAGTTGCGTGATCATCGCCAACCATCAGTCC
AACTATGACCTGTTTGTGTTTGGCACCGTGGTGCCCTACCGCACGGTGTG
TATCGGCAAGAAGAGCCTGAAGTGGGTGCCGTTGTTTGGGCAACTGTTCT
GGCTGGCGGGCAATGTGTTGATTGACCGGGGCAACGCCCACAAGGCGCGG
CGCTCGATGCTGACCACCACACAAACCTTGCAGCATGCAGACACCTCGAT
CTGGGTGTTCCCGGAGGGCACGCGCAACTTCGGCGAAACCCTGCTGCCGT
TCAAGAAAGGCGCGTTCCAGATGGCGATCGCCGCAGGCGTGCCGATTGTG
CAGGTGTGTGTCAGCACTTACGTGAAGCAGATGAAGCTCAACCGCTGGAA
CAGTGGCGATATTCTGATTCGCTCGCTGCCGCCGATTCCTACGAAGGGGC
TGACGATGGATGACATGCCGCTGTTAATGCAGACCTGCCGTGAGCAAATG
CGCGATTGCATCGAGGCGATGGATCGCGAGCTGCAAACTGCGCCTGCAAT
CACGGGTGAACCCCGCCGAATTTGCTGACTCTGATTGGGCAGGGCAGCTA
AGCTGCCTGACAGTTGTCATCTGCCATTCAAGAAGAAGCGATCAGCACTA
ATGGGAGAA
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