EY685227

Overview
NameEY685227
Unique NameEY685227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685227 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.772e-45
Identity = 92/143 (64.34%), Postives = 112/143 (78.32%), Query Frame = 3
Query:  171 MSCFGCCEEDDMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAPVSMVSRLKHEKLLVQLLGDCAGGTSRGFASE 599
            MSCF CC++DDMH+A DNG  +M  +SAG +G   A+E+A +  Q V +QPI VP+I+VDELK+IT+NFG+ ALIGEGSYGRVY+G+LKSG AAAIKKLD+SKQPD EFLA VSMVSRLK E  +V+LLG C  G  R  A E
Sbjct:    1 MSCFSCCDDDDMHRATDNG-PFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPDREFLAQVSMVSRLKDEN-VVELLGYCVDGGFRVLAYE 141          
BLAST of EY685227 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.020e-39
Identity = 93/163 (57.06%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  171 MSCFGCC-EEDDMHKAADNGNAYMVKSS--AGTDGAYH-ASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAPVSMVSRLKHEKLLVQLLGDCAGGTSRGFASEIRLQ*DLPREILPGKE 647
            MSCFGCC E+DDMHK AD G  +        G D  +H ASE A KG   VK+QPIEVP I   ELKE T++FG+N+LIGEGSYGRVYYG+L +   +AIKKLD++KQPD EFLA VSMVSRLKH+   VQLLG C  G SR  + E      L  +IL G++
Sbjct:    1 MSCFGCCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNEFLAQVSMVSRLKHDN-FVQLLGYCVDGNSRILSYEFANNGSL-HDILHGRK 161          
BLAST of EY685227 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.809e-20
Identity = 60/142 (42.25%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  186 CCEEDDMHKAADNGNAYMVKSS-------AGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA--SKQPDEEFLAPVSMVSRLKHEKLLVQLLGDCAGGTSR 584
            CC   D   A    N Y    +        G +     +  AP+     KV PIE+P++++DEL  +  NFG  ALIGEGSYGRV+ G  K G A AIKKLDA  S++PD +F + +S+VSRLKH+   V+LLG C    +R
Sbjct:    3 CCGGADEEPAGPPANQYAAPPNKAGNPNFGGGNRGEPRNPNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDH-FVELLGYCLEANNR 142          
The following BLAST results are available for this feature:
BLAST of EY685227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PTI1_SOLLC2.772e-4564.34Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2706_ARATH1.020e-3957.06Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH1.809e-2042.25Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-D01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685227 ID=EY685227; Name=EY685227; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGAGCGCTTTATACGTTTTTCTTCATCCTGCGCACCTATCG
TCGTCTTATCCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATTCAAAA
TATCCAGCTCGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAGAGGGG
CATTATTGTGGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAGAAGAT
GATATGCATAAAGCTGCTGACAATGGCAATGCATACATGGTTAAAAGTTC
AGCAGGAACTGATGGAGCCTATCATGCATCTGAAGCAGCACCTAAGGGTG
CTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAGTGGAT
GAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGA
AGGTTCATATGGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTG
CAGCAATAAAAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGTTTTTA
GCACCGGTTTCCATGGTATCAAGGTTGAAGCATGAAAAACTTTTGGTTCA
ACTGCTCGGGGATTGTGCTGGTGGGACTTCCCGTGGGTTTGCCTCCGAGA
TTCGCCTCCAATAGGATCTCCCACGCGAAATTCTTCCGGGGAAGGAACGC
GGGAAAGAGGACCTCACAGCCGCGCCAAGTTCGGTGTCGCGCGCCACCAA
ATGAAGAGTGGCTGGACAGGCCTGACAGCAGGTTCCGGATATTACCAAGA
GAGCGGAAAAACCCGCGCCTTCGTCAGGTCGCCCCACCTGAGCCCACCCC
AGCACTCCCGAAGAGGTGGTAGCAGAAGAGCGAGCGCGAGAGGCGGCCGC
AGGCGGTGGCGCACACCACGCCCCGGAGGCCGAGACGCCAGGAGCTTGGA
GGCGATGCGCTC
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