EY685211

Overview
NameEY685211
Unique NameEY685211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8832 contig Csv1_Contig8832:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY685211 vs. ExPASy Swiss-Prot
Match: 1A110_ARATH (Probable aminotransferase ACS10 OS=Arabidopsis thaliana GN=ACS10 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.356e-29
Identity = 78/149 (52.35%), Postives = 83/149 (55.70%), Query Frame = 2 
Query:  254 TAMRVIVPLQGVVQGRGGLFLGSVIPCALFYFLQLYLKRFR-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLTEHHGXXXXXXXXXXXXXNVGGPACVSGRVISILKTGE-TPCDVGSKQVEDDPYDEVGNPGGVIQLGLAQN 682
            T MRVIVPLQGVVQGRGGLFLGSVIPCA FYFLQ YLKR R                                  G LTE  G             N GG   VSGRV  +LK G+ +P  VG K+VEDDPYDE+GNP GVIQLGLAQN
Sbjct:   29 TGMRVIVPLQGVVQGRGGLFLGSVIPCAFFYFLQFYLKRNRKNDESDNSGEQNSSASSSSSPNSGLPDPTRSQSAGHLTELTGLPRSLSRILLSPRNSGGAVSVSGRVNCVLKGGDSSPYYVGQKRVEDDPYDELGNPDGVIQLGLAQN 177
[Close]
BLAST of EY685211 vs. ExPASy Swiss-Prot
Match: 1A112_ARATH (Probable aminotransferase ACS12 OS=Arabidopsis thaliana GN=ACS12 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 54/145 (37.24%), Postives = 72/145 (49.66%), Query Frame = 2 
Query:  260 MRVIVPLQGVVQGRGGLFLGSVIPCALFYFLQLYLKRFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLTEHHGXXXXXXXXXXXXXNVGGPACVSGRVISILKTGETPCDVGSKQVEDDPYDEVGNPGGVIQLGLAQNKVFF 694
            MR+IVPL+GV+QGRGGLF+GS+IPC LFYFLQLYLKR R                                                  N  G   VS R + + K  ++P  +G ++V+ DPYD + N  G+IQLGLA++ + F
Sbjct:    1 MRLIVPLRGVIQGRGGLFVGSLIPCCLFYFLQLYLKRRRPPPSDPTDL----------------------------PRTFSRTNLFSRGNSIGRVRVSSRAVPVAKPSDSPYYIGLERVKTDPYDRITNTDGIIQLGLAESTLCF 117
The following BLAST results are available for this feature:
BLAST of EY685211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
1A110_ARATH3.356e-2952.35Probable aminotransferase ACS10 OS=Arabidopsis tha... [more]
1A112_ARATH4.546e-1837.24Probable aminotransferase ACS12 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-B07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685211 ID=EY685211; Name=EY685211; organism=Citrus sinensis; type=EST; length=738bp
TAAAATTTTACAAATTCAAAAATAAAAACACCAAAAAAAGGAAAATAAAA
TTTAAACAATAGAAGCACCAGTGACAGCATCCTCCCTTCGGCTTTGTAAT
CAACGTGCCCAATTTACTCATCGAAGCCACCCGATATTTTTCCCATCTCC
GGCAACATCCCTCCATGAGTCCATTTCAGTTCTTACAATGACCCGAGCCC
GAGCCGACGAGGAACCCAAGCCAATCAGTAGTTCGAGCAGCAGCGGTGGA
GGAACCGCCATGAGAGTGATTGTACCGTTACAAGGGGTGGTTCAAGGGAG
GGGAGGTCTGTTTCTGGGCTCCGTAATCCCATGTGCCCTCTTTTACTTTC
TCCAGCTTTACCTCAAACGATTCCGTAATGACCCGGGTGACCCCAACGAC
CCGAGCTCATCTTCTCCGACACAGAATACGGCTTCTTCCGCTCCGTCGCG
GTCCAGTTCCTCGGGGCAGTTGACGGAGCATCATGGGTTGCCGCGGAGTT
TGTCTCGGTCGCTGCTGTCGCCGAGAAATGTGGGCGGACCCGCTTGTGTG
TCGGGTCGGGTCATCTCCATTTTGAAGACTGGTGAGACGCCGTGCGATGT
GGGTTCAAAGCAGGTTGAGGACGACCCGTACGATGAAGTGGGCAATCCGG
GTGGGGTTATCCAGCTTGGTTTGGCGCAAAACAAGGTGTTTTTTTTATAA
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG
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