EY685210

Overview
NameEY685210
Unique NameEY685210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685210 vs. ExPASy Swiss-Prot
Match: SPF27_ARATH (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.001e-26
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 1 
Query:  148 RMQRLAQEQNEKIEAVNRERKYHQQNTAYELNALSTQWRELCAKNIEIQAACANIESHIEELRKEAAESGWNLDIDME 381
            RMQRLAQEQNE+IE VNRERKYHQQ T+YELNALS +WR+LC KN+EIQ+ACA +E+ I+  +KEAAE GWNL+  +E
Sbjct:  168 RMQRLAQEQNEEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEEKLE 245
The following BLAST results are available for this feature:
BLAST of EY685210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SPF27_ARATH1.001e-2670.51Pre-mRNA-splicing factor SPF27 homolog OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685210 ID=EY685210; Name=EY685210; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGCTTGAAAATTAGCAAGTTTGTGATTGCGCTGCTGCAGTT
AACGCTTTTTGAAATGATACACCTCTTTCTTTATCACTTGCAGTAATAAT
TTTGCATTTTACCTCGGCTATTGCTTAATCATTTTTCTCCTTTTTTCAGA
ATGCAGAGATTAGCTCAGGAGCAAAATGAAAAGATTGAAGCTGTAAATCG
TGAAAGAAAATATCATCAGCAAAATACTGCATATGAGTTGAATGCTTTGT
CCACACAATGGAGGGAGCTTTGTGCCAAAAATATAGAAATCCAAGCTGCT
TGTGCAAATATTGAAAGTCACATAGAGGAATTGAGGAAAGAAGCTGCTGA
GAGTGGCTGGAACTTAGATATTGATATGGAGAAAGGGTTTTTGGCGCAAT
CAGGACAGTAAGTGGTTTTTTGGCCTGTCAATTATGCAGCATTTAATTTA
GACCTGATGCAATGCAGTGGTTCTGTATCCTATTAAGATAACCTTTCCCT
TAATATTTTTAGTTATAAATGTTTTCTAAAAACTGATTTTTGGCTCAGAT
CTTTTTGTTTCTAAGGAACTAGTATTTCATTTTTTTGTGTAGCTCTCATG
ATAAATCTAAAAACAAAGAGAGATTTGCCAATGAGTAAAACTATGTGAGT
TTCTTATAAAAAACTAACAATAACATTAACAATGACAATAATAATGATAA
TAATACAACTATTTTTATTTATTTGTTTGTTTTCCTTTCAAAAAACCATT
TTTTATTTCATATTGGTTTTAACAAAAGGCTTAATGCTTGATAATCATAA
CTTTTGATGTTAAAGCGGGGGGTTGGACAAAGAATAGGGATGGACCTTTT
ATCTGCTTTGAAAAAAAAAGGTTCTCCTAAATGGTTTACCGCTTCCCAAA
AAAAATTTGGCCTAA
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