EY685190

Overview
NameEY685190
Unique NameEY685190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.120e-43
Identity = 85/154 (55.19%), Postives = 113/154 (73.38%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEK--AGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            RFP+LQ            +FR+E +K+VIRLVDME++YLT EFFRKLPQE+E+    +   + + +S  +D+Y DGHFRRI SNVS+YV MVS+TLR TIPKA VYCQVR+AKL+LLN+FY+ I ++E  QLG   DEDP +M+  + CA+R+E
Sbjct:  455 RFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIERPVTNSKNQTASPSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLE 608          
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 7.600e-41
Identity = 88/152 (57.89%), Postives = 104/152 (68.42%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            RFPTL             RFRDE RKTV+RLVDME+SYLTVEFFRKL  E EK     N  N  +   D YSD HFR+IGSNVS+Y+ MV +TLR ++PKA+VYCQVREAK SLLN FY  +GRKE+ +LG   DEDP +ME     A+R+E
Sbjct:  450 RFPTLASDIAAAANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEK--EKPNPRNAPAPNADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLE 599          
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 3.304e-36
Identity = 77/152 (50.66%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            RFP+LQ            +FR+E  K+V+RLVDME+SYLTV+FFRKL  E +       S ++ + A+D+Y DGHFR+I SNV++Y+ MV+ETL  TIPKA+V+CQVR+AKLSLLN+FY  I + +  +LG   DE+P +ME  + CA+R+E
Sbjct:  450 RFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNM-----SLSSPTSAIDQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLE 596          
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.653e-35
Identity = 79/152 (51.97%), Postives = 100/152 (65.79%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            ++PTL+            R RDE RK  + LVDME+ YLTVEFFRKLPQ+ EK GNP +S        DRY+D + RRIGSNV SYV MV   LR +IPK+IVYCQVREAK SLL+ F+T +G+KE  +L    DEDP + +   + A+R+E
Sbjct:  449 QYPTLRVEVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTHS------IFDRYNDAYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIAKRLE 594          
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.772e-35
Identity = 75/152 (49.34%), Postives = 101/152 (66.45%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            ++P L+            R RDE ++  ++LVDME  YLTV+FFRKLPQ+V+K GNP +S        DRY+D + RRIG+ + SYV MV  TLR +IPK+IVYCQVREAK SLL+HF+T +G+ E  +L    +EDP +ME   A A+R+E
Sbjct:  449 QYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHS------IFDRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLE 594          
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.388e-34
Identity = 75/152 (49.34%), Postives = 101/152 (66.45%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            ++P L+            R RDE ++  ++LVDME  YLTV+FFRKLPQ+V+K GNP +S        DRY+D + RRIG+ + SYV MV  TLR +IPK+IVYCQVREAK SLL+HF+T +G+ E  +L    +EDP +ME   A A+R+E
Sbjct:  449 QYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHS------ICDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLE 594          
BLAST of EY685190 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.535e-33
Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 1
Query:    1 RFPTLQXXXXXXXXXXXXRFRDEGRKTVIRLVDMEASYLTVEFFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTHIGRKERYQLGGGGDEDPTMMESEIACARRIE 456
            ++P L+            + R+  +K  ++LVDME SYLTV+FFRKLPQ+VEK GNP +S        DRY+D + RRIGSNV SYV MV   LR +IPK+IVYCQVREAK SLL+HF+  +G  +  +L    +EDP +ME   A ++R+E
Sbjct:  449 QYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTHS------IFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLE 594          
The following BLAST results are available for this feature:
BLAST of EY685190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DRP1E_ARATH8.120e-4355.19Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1C_ARATH7.600e-4157.89Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1D_ARATH3.304e-3650.66Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
DRP1B_ARATH3.653e-3551.97Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
SDL5A_SOYBN4.772e-3549.34Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN1.388e-3449.34Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1A_ARATH1.535e-3348.68Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-H07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685190 ID=EY685190; Name=EY685190; organism=Citrus sinensis; type=EST; length=958bp
CGCTTCCCAACTCTGCAAGCTGAGATAGCAGCTGCTGCGAATGAGGCTTT
GGAAAGGTTCCGTGATGAGGGCAGGAAGACAGTTATCCGTTTGGTGGATA
TGGAAGCTTCATATTTAACAGTTGAATTCTTTCGTAAGCTTCCCCAGGAA
GTGGAGAAAGCAGGAAATCCTGGAAATTCTGGAAATACTGCTTCCCAGGC
AGTTGATCGGTATTCAGATGGTCACTTTAGGAGGATAGGATCAAATGTGT
CCTCATATGTGGGTATGGTGTCGGAAACACTTAGGACCACTATTCCTAAG
GCAATTGTTTATTGCCAAGTTAGGGAGGCCAAGCTGTCATTATTAAATCA
CTTCTACACTCATATAGGCAGGAAAGAGCGCTACCAGCTTGGGGGGGGGG
GGGATGAAGACCCTACGATGATGGAAAGCGAGATAGCGTGTGCTAGGAGG
ATAGAAAAGGCCACGGCCCCCACGAGAATCAGATCATTGCACCTCACGGG
AACCGCGACAGCACAACCCCAGGAGATGCTCAGGTGGCCTGCACAGCGCC
GGCGCGCACGGGCCCCCGTAGCGGCACAGAGGGCGATGACACCGACTCGA
ACGCATGCGTAACCGGCGACTCACCCACGCGGCCCACCGGCCGACAGCGC
GGGCCCCCCAGCGCCGGAGGTACACCCATTCTGCTGGGAGCGCAGCGCGC
TGCCACCAAAGGCAGCGGACGCAGCCTACCGCGCTGGCGCCTAGCGAGCG
AGAAGACCACAGACAGCAAGAACCCCCACCCCCCGCGAATCGCAGCAGCG
CCCGCGATATAGAGTGACCCGAGGCGGGCGCGACGCACAGCACGACNGAA
GCCCGGGGACGCACAACAACGCCCCCGGAACAAGGCTCACTCTCCCCAAC
CCCGCAAACCCGCACGCCAAACATCAACACCAGCAGGGCCACAAGGATAG
GCGAGGAA
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