EY685184

Overview
NameEY685184
Unique NameEY685184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685184_ssr70 microsatellite EY685184_ssr70:70..84. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685184 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.422e-27
Identity = 62/85 (72.94%), Postives = 71/85 (83.53%), Query Frame = 1
Query:  124 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTASEFRR 378
            DD +IRQVV ++    EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFK+NL +AK  Q  DPTA HG+TKFSDLTASEFRR
Sbjct:   26 DDFIIRQVVDNE----EDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRR 106          
BLAST of EY685184 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = 1
Query:  121 GDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTASEFRR 378
            GDD +IRQVV      +E  +L +E HFSLFK KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR+
Sbjct:   28 GDDLVIRQVVGG----AEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRK 109          
BLAST of EY685184 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.786e-21
Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 1
Query:  124 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTASEFRR 378
            +D +IRQVV    +++E  +L++E HF+LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR
Sbjct:   26 EDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRR 106          
BLAST of EY685184 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.870e-21
Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  124 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTASEFRR 378
            +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R QLLDP+A HGVTKFSDLT +EFRR
Sbjct:   24 EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRR 106          
The following BLAST results are available for this feature:
BLAST of EY685184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CYSP_PEA1.422e-2772.94Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH1.127e-2466.28Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH5.786e-2160.00Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE9.870e-2161.18Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-H01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685184 ID=EY685184; Name=EY685184; organism=Citrus sinensis; type=EST; length=871bp
CCCACGCGTCCGTCCTTCCTCTCTGTCCACTGAAACAAATCAAAAATGGA
CCGCCGTATTCTCTCCTCTCTCCTCCTCCTCCTCCTATCTGCTGTGCTTG
CGTCCGCCGTAGCTGTCAGCGGCGACGATGCTATGATCAGACAGGTCGTG
CCATCAGACGGCGAACAATCCGAAGATCATCTCCTGAACGCGGAGCACCA
CTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTTACGCCACTCAGGAGG
AGCACGATTACCGATTCCGCGTGTTCAAGGCTAACCTCCGCCGAGCAAAG
CGACGCCAGCTCCTGGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTC
CGACTTAACGGCGTCTGAATTCCGCCGGCCGCTACCTTGCCCTTGAGTGG
GGGGGGGCACATCACCCCTGCGCTTCGCGCGGTTCCAACCATCACCCCAG
GACCCACCTCCCTCATGCCCCTCACCCCCACTCACCAACTACGCACCCGC
GGGCACGCAGCGCCTGGCGCCAAGAGGGGGCGACGCCGACGACCGCATGC
GGCGCACACGGACGCCCCACAAAGCCACACCCCCGGCGCCACGCGCCGCC
CCAGCAAAGAACAACAGAGAGCGCCGAGCGAGCACCGACTAAAGACCCCA
CACCGAGACCAACAGCCCGAACCACAGCACGCACGCGGCAACACAACGGC
ATCCCCCCCCGACCGACCCGCTCCACAGAACACACCCCGCCAGCCACGCC
GACGCCAAAGGGCAGCACGCAGAGCACAACCCGGACAGCCGGGCGGAGCA
CGGCGTGGCACGGACCGCCACAGGGCGACCCAAAGGCGCACGCCCCCACG
CCTAACAGAGCCCGGCCACAG
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