EY685173

Overview
NameEY685173
Unique NameEY685173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685173 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.551e-59
Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 1
Query:   13 IQNHNLPLAETEGSYTVQQNYISLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTE 396
            IQ HNL LAE+EGSYTVQQNY SLDIHVGQSYSFLVTMDQNAS+DYYIVASAR VNE+ W+RVTGV IL YTNSKGKA+G LP GP DEFDKTFSMNQARSIRWNVSASGARPNPQGSF+YGSINVT+
Sbjct:  238 IQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTD 365          
BLAST of EY685173 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.380e-45
Identity = 88/127 (69.29%), Postives = 99/127 (77.95%), Query Frame = 1
Query:   13 IQNHNLPLAETEGSYTVQQNYISLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT 393
            IQNH L L ETEG YT Q N+   D+HVGQSYSFLVTMDQNA++DYYIVASARFVNE+ W+RVTGV ILHY+NSKG A GPLP    D      +MNQ R+I+ N SASGARPNPQGSF YG IN+T
Sbjct:  240 IQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINIT 366          
BLAST of EY685173 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 7.054e-44
Identity = 86/127 (67.72%), Postives = 100/127 (78.74%), Query Frame = 1
Query:   13 IQNHNLPLAETEGSYTVQQNYISLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT 393
            IQNH+L L ETEG YT Q N+   D+HVGQSYSFLVTMDQ+A++DYYIVASARFVNE+ W+RVTGVAILHY+NSKG   GPLP    D      +M+Q ++IR N SASGARPNPQGSF YG IN+T
Sbjct:  241 IQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINIT 367          
BLAST of EY685173 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.255e-28
Identity = 66/127 (51.97%), Postives = 84/127 (66.14%), Query Frame = 1
Query:   16 QNHNLPLAETEGSYTVQQNYISLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK-TFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT 393
            Q H + L E EGS+TVQ  Y SLD+HVGQ  S LVT DQ    DYY+V S+RF+ ++    ++ VAI+ Y N KG A   LP  P +  +   +SMNQ RS RWN++AS ARPNPQGS+ YG IN+T
Sbjct:  233 QGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPK-DYYLVVSSRFLKQA----LSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINIT 354          
BLAST of EY685173 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.745e-26
Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 1
Query:   13 IQNHNLPLAETEGSYTVQQNYISLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT 393
            IQNH + L E EGS+ +Q +Y SLD+HVGQ +  +VT +Q    DYY+VAS+RF+       +T   +L Y   KG A   LP GP       +S+NQ RS RWN++AS ARPNPQGS+ YG IN+T
Sbjct:  234 IQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPK-DYYMVASSRFLKTV----ITTTGLLRYEGGKGPASSQLPAGP---VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINIT 352          
The following BLAST results are available for this feature:
BLAST of EY685173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SKU5_ARATH4.551e-5986.72Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS2_ARATH6.380e-4569.29Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH7.054e-4467.72Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
ASOL_TOBAC9.255e-2851.97L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
ASOL_BRANA1.745e-2648.82L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685173 ID=EY685173; Name=EY685173; organism=Citrus sinensis; type=EST; length=934bp
CACGCGTCCGGGATCCAAAACCATAATCTCCCTTTAGCAGAGACAGAGGG
ATCATATACAGTGCAACAGAATTATATTAGCTTAGATATACACGTAGGAC
AATCTTATTCGTTTTTGGTAACCATGGATCAAAATGCTAGTACCGATTAT
TACATTGTTGCAAGCGCAAGGTTTGTGAATGAATCACAATGGAAAAGAGT
TACTGGTGTTGCCATCTTGCACTATACAAATTCCAAAGGAAAGGCACGCG
GTCCCCTCCCAGAAGGACCAAATGATGAATTTGACAAAACCTTCTCCATG
AACCAAGCAAGATCCATCAGATGGAATGTATCTGCAAGTGGTGCCCGTCC
AAATCCACAGGGTTCTTTTCGATATGGCTCAATCAATGTGACTGAAGCCA
ATGCGCGGGGAGGAAGCAACCCCCACTGATTGACGGATAACGCGGGGCAA
ATCTACGCTGGCACGTCGCCGGCAATCGCCCACTACCACTCCACAATACA
CCTGACAAAAAGTACGGGGCAGAAGCAACCCAGAAATACCAGCCACCAAC
GCACCGCAAAAGAGGCACCCAGGGACAGAACGACCCGAACGGAAGACCCG
TCCCCGACCAGCCCTAACACTCGCAGAACACGCACCCCCGCCCCAACCAA
GCAACGACGCCCCCCTCCATCGCCCACCACGACGACCGCGACCAAACGGC
GCGGCCGGCAGACGCCACACCCCCCACACCCCGGCCCCACCCGCAAACCA
CGCACGCACACGCCCCACAGGACCCACCGCCAGGCAACACGCCCAACCCC
GCGCACCCCAGCCACACAAGAACCCAACCACGCGAACCACACGGATACCC
GCGCAAGGCACCGCCGCCGACACGCACACCAACGGCTCCGCACCCCCATC
TGTACAGAAAGAGGCCCCAACTGCCACGCTCACC
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