EY685164

Overview
NameEY685164
Unique NameEY685164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685164 vs. ExPASy Swiss-Prot
Match: IF4G1_ARATH (Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.109e-41
Identity = 83/120 (69.17%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:   13 RDEKEVAWCIKDLNSPGFHPSMVSLWVTDSFERKDMERDLLAKLLVNLAKSREGMLSQGQLIKGFESVLTTLEDAVNDAPRAAEFLGRIFAKVVEENVIPLREIGRSLPDSEEEPGHLHE 372
            RDE E+  C+KD+NSP +HP+M+SLWVTDSFERKD ERDLLAKLLVNL KS +  L++ QL+KGFESVL TLEDAVNDAP+AAEFLGRIF K V E V+ L EIGR + +  EEPG L E
Sbjct: 1553 RDENEIGMCMKDMNSPAYHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSADNALNEVQLVKGFESVLKTLEDAVNDAPKAAEFLGRIFGKSVTEKVVTLTEIGRLIQEGGEEPGSLIE 1672
The following BLAST results are available for this feature:
BLAST of EY685164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IF4G1_ARATH1.109e-4169.17Eukaryotic translation initiation factor 4G OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685164 ID=EY685164; Name=EY685164; organism=Citrus sinensis; type=EST; length=925bp
CGGACGCGTGGGCGGGATGAGAAAGAAGTTGCTTGGTGTATCAAAGATTT
GAATTCCCCAGGTTTCCACCCTTCAATGGTCTCTCTCTGGGTAACAGACT
CTTTTGAGAGGAAGGACATGGAAAGGGATCTTTTGGCTAAGCTGCTTGTG
AATCTTGCTAAATCTCGGGAAGGCATGTTAAGTCAAGGCCAGCTCATCAA
AGGGTTTGAATCTGTTCTCACTACTTTGGAGGATGCAGTAAATGATGCTC
CAAGAGCAGCAGAATTTCTTGGCCGTATATTTGCCAAAGTTGTCGAAGAG
AATGTGATTCCCTTGAGGGAGATTGGGAGGTCGTTACCCGACAGTGAAGA
GGAACCTGGCCATCTTCACGAGAATCAGGCTTGCCCCCGACTGGGGGGGG
GGGGGGGCAAACACCCTCAGACCGCACAACCGCCCACCCCCACTCCCCCG
ACCCCCCCACCGACCCCCGCCTCAACCCCGCCGCGCCCAAGACCCCCCGC
AAAGCCACGCCCCCCGCACCAGCGACCACGCACAAGGCAGAGCGCCGGGG
AGCAGGGCACCCGCCACGCGGTGCCGCCCCCCCGCCGGCACCACCGCGCC
CCGATGCAGGGCCCCGCTGAGCGCAGCGGGCGCGCCCTCACGACAACACG
AAGGACGGGGCATCCCCCGGGCAGGCAGCGACCCCGCGCACCCCGTGCGA
GCAGCGGTCAAGCCGACCGGGCCCGCCACCGCCCACCCACCCGCACCCAC
CCCGCGCACGGCAGCAGAGCCGCGGCACCGAGCGCCCCACCGCCCCAACC
CACGAGGCGCGCACAAGGGCGCGCAACGCCGCCACACCGGCGCACCCCGC
ACCCACGCCAGCCCACGCAGACCGCGCCCACCCCCCGGCACCCCGCCCCC
ACGCGCCCACCCACACGAGCAACAG
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