EY685163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.710e-38 Identity = 80/132 (60.61%), Postives = 106/132 (80.30%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLE 516 MVRGK QMK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEV++IIFS KG+LYEF+SS MQ T++RY R+T++R + E MQ LK+E ANM++KI+ +E S RKLLG+ + + + E+ + ++ QLE Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLE 132
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.832e-32 Identity = 73/135 (54.07%), Postives = 101/135 (74.81%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPL 525 MVRGK QMK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +G+LYEF+S+ QKT+ERY YT+E I +++ ++Q+K + + +K++ +E RKLLG+ L + E+ L+ +LE L Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKE-NIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSL 134
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.329e-32 Identity = 69/138 (50.00%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS-EMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 MVRG+ ++K+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +GRLYEF+S+ +QKT++RY YT++ ++ +++ +QQ+K + + +K++ ++ S RK+LG++L + E+ R L+ +LE L + Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHK 137
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 6.960e-32 Identity = 69/136 (50.74%), Postives = 106/136 (77.94%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS-EMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPL 525 MVRG+ ++K+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +GRLYEF+S+ +QKT++RY YT++ ++ +++ +QQ+K + + +K++ ++ S RK+LG++L + E+ R L+ +LE L Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSL 135
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.550e-31 Identity = 73/138 (52.90%), Postives = 102/138 (73.91%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 MVRGK +MK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+IIFS +G+LYEF SSS + KT+ERY + ++ + + QQ K E + KI+H+E+S RK++G+ L + + E+ + L++QL+ L + Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDN-SQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMK 137
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.645e-31 Identity = 73/138 (52.90%), Postives = 101/138 (73.19%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMER-YMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 MVRGK +MK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA++IFS + +LYEFSSS + T+ERY R +E I N QQ + E + + +KI+ +E+S RKLLG+ + + + E+ + L++QL+ L + Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKE--IGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSR 136
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.222e-29 Identity = 68/137 (49.64%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 M RG++++K+IEN +RQVTFSKRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF S+ + KTLERY Q N + Q HE++ + K + ++ + R LLG+DL + ++ + L+ QLE L Q Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSE-TQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQ 136
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 7.202e-29 Identity = 71/142 (50.00%), Postives = 98/142 (69.01%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SSSEMQKTLERYYRYT----EERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+I+FS +G+LYEF S+S M KTLERY R + E Q + Y + LK + K+ ++ SHR LLG+DL + ++ L+HQL+ L+Q Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLK-----LKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQ 137
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 2.737e-28 Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQ 528 M RGK+Q+K+IEN +RQVTFSKRRNG+LKKA+E+SVLCDAEVA I+FS KG+LYE+++ S M K LERY RY+ + + HE + KI+ I+ H+ L+G+DL S ++ + L+ QLE L+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLK 137
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.668e-28 Identity = 80/223 (35.87%), Postives = 122/223 (54.71%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQTSPTIGPDCCYKHGAHLQKGRKD-RSQTRTHPMICSRENAKXXXXXXXXXXXDSYAAVTRLDASPLTTRQSTDPTPTIASLNANP 783 M RG +Q+++IEN +RQVTFSKRRNG+LKKA+E+SVLCDA+VA+I+FS KG+LYEFSS S M+ LERY RY+ + + + E + K+ ++ S R+LLG+ L + T ++ + L+HQLE L+ ++ + LQK K ++Q + E K + A + +P+T + DP PT + + P Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKN-QLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREEQNGATPSTSSPTPVT---APDPIPTTNNSQSQP 219 The following BLAST results are available for this feature:
BLAST of EY685163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685163 ID=EY685163; Name=EY685163; organism=Citrus sinensis; type=EST; length=1005bpback to top |