EY685162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685162 vs. ExPASy Swiss-Prot
Match: CHIP_ARATH (E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.497e-54 Identity = 102/179 (56.98%), Postives = 132/179 (73.74%), Query Frame = 2 Query: 20 IQLDLYSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKRSWELQSXXXXXXXXXXXXHVLDISRKEGFLDEASSTHLKQMEALRQVFRKAAQHDTPAEVPDYLCCKITLDIFRDPVITPSGVTYDRAVILDHLDKVGKFDPITHLTMD 556 IQL SVK HY+LG LLQ+ E+ +G+KEL++AL+LGR + P GY+VE+IW+EL++AKY+ WE S+ RSWEL S LD+SR E DEA + H ++++AL +VF+KAA+ D P EVPDYLCC ITL+IFRDPVI+PSGVTY+RA IL+HL KVGKFDPIT +D Sbjct: 71 IQLVHNSVKAHYMLGLALLQKKEFTNGVKELQRALDLGRCSNPTGYMVEEIWEELSKAKYMEWELVSAMRSWELNSLKETCEAALNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKID 249
BLAST of EY685162 vs. ExPASy Swiss-Prot
Match: STUB1_CHICK (STIP1 homology and U box-containing protein 1 OS=Gallus gallus GN=STUB1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.813e-18 Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 20 IQLDLYSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDI--SRKEGFLDEA---------SSTHLKQMEALRQVFRKAAQHDTPAEVPDYLCCKITLDIFRDPVITPSGVTYDRAVILDHLDKVGKFDPITH--LTMD 556 ++LD SVK H+ LGQ ++ Y + I L++A NL + + +DI L AK W KR EL S + + +++E +DE+ + H K + + ++F + + ++PDYLC KI+ ++ R+P ITPSG+TYDR I +HL +VG FDP+T LT D Sbjct: 97 LELDGQSVKAHFFLGQCQMEMENYDEAIANLQRAYNLAKEQRLN--FGDDIPSALRIAKKKRWNSIEEKRINQENELHSYLTRLIMAEKERELAECRKAQQEENVDESRGRVQLAGIEAKHDKYLADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQD 289
BLAST of EY685162 vs. ExPASy Swiss-Prot
Match: STUB1_MOUSE (STIP1 homology and U box-containing protein 1 OS=Mus musculus GN=Stub1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.367e-18 Identity = 60/187 (32.09%), Postives = 91/187 (48.66%), Query Frame = 2 Query: 20 IQLDLYSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDISRK-EGFLDEA---------SSTHLKQMEALRQVFRKAAQHDTPAEVPDYLCCKITLDIFRDPVITPSGVTYDRAVILDHLDKVGKFDPIT 541 ++LD SVK H+ LGQ L+ Y + I L++A +L + + +DI L AK W +R EL S + + R EG D+ + H K M + ++F + + ++PDYLC KI+ ++ R+P ITPSG+TYDR I +HL +VG FDP+T Sbjct: 88 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN--FGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVT 272
BLAST of EY685162 vs. ExPASy Swiss-Prot
Match: STUB1_HUMAN (STIP1 homology and U box-containing protein 1 OS=Homo sapiens GN=STUB1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.092e-18 Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 20 IQLDLYSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDISRK-EGFLDEA---------SSTHLKQMEALRQVFRKAAQHDTPAEVPDYLCCKITLDIFRDPVITPSGVTYDRAVILDHLDKVGKFDPIT 541 ++LD SVK H+ LGQ L+ Y + I L++A +L + + +DI L AK W +R EL S + + R EG D++ + H K M + ++F + + ++PDYLC KI+ ++ R+P ITPSG+TYDR I +HL +VG FDP+T Sbjct: 87 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN--FGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVT 271 The following BLAST results are available for this feature:
BLAST of EY685162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685162 ID=EY685162; Name=EY685162; organism=Citrus sinensis; type=EST; length=956bpback to top |