EY685115

Overview
NameEY685115
Unique NameEY685115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685115 vs. ExPASy Swiss-Prot
Match: VILI4_ARATH (Villin-4 OS=Arabidopsis thaliana GN=VLN4 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.729e-25
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 3
Query:   12 DEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 212
            DEE +P +PY+RLK TSTDP+++IDVT+RE YLSSEEF+EKFGM K+AFYKLPKWKQNK KMA+QLF
Sbjct:  908 DEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF 974          
BLAST of EY685115 vs. ExPASy Swiss-Prot
Match: VILI1_ARATH (Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.240e-16
Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 3
Query:   33 YPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 212
            Y YE+L++ S  P+T+ID T+RE YL+ +EF E+FGM K  FY LPKWKQNKLK++L LF
Sbjct:  850 YSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 909          
BLAST of EY685115 vs. ExPASy Swiss-Prot
Match: VILI3_ARATH (Villin-3 OS=Arabidopsis thaliana GN=VLN3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 3
Query:   33 YPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 212
            + YERL+  S  P+T ID  +RE YLS  EF+  FGM+K++FYKLP WKQ+ LK    LF
Sbjct:  907 FTYERLQAKSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKKFNLF 966          
BLAST of EY685115 vs. ExPASy Swiss-Prot
Match: VILI2_ARATH (Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 3
Query:   33 YPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 212
            + YE+L+  S +P+T ID  +RE YLS EEF+  FG++K+AF  LP+WKQ+ LK    LF
Sbjct:  917 FTYEQLRAKSENPVTGIDFKRREAYLSEEEFQSVFGIEKEAFNNLPRWKQDLLKKKFDLF 976          
The following BLAST results are available for this feature:
BLAST of EY685115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
VILI4_ARATH4.729e-2576.12Villin-4 OS=Arabidopsis thaliana GN=VLN4 PE=1 SV=1[more]
VILI1_ARATH5.240e-1660.00Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2[more]
VILI3_ARATH1.744e-1153.33Villin-3 OS=Arabidopsis thaliana GN=VLN3 PE=1 SV=1[more]
VILI2_ARATH6.629e-1150.00Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-A01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685115 ID=EY685115; Name=EY685115; organism=Citrus sinensis; type=EST; length=835bp
CCACGCGTCCGGATGAGGAAGGTGTCCCCATCTATCCTTATGAACGCCTC
AAGATAACATCAACCGATCCCATAACAGAAATCGATGTGACCAAGCGAGA
GACTTATCTGTCATCAGAGGAGTTCAGAGAGAAATTTGGAATGAAAAAAG
ATGCTTTCTATAAATTGCCAAAATGGAAACAGAACAAGCTTAAAATGGCT
CTTCAGTTGTTCTGAGTCTCCTTGTTGCCTCTGCATTGTGTTCATCTCCC
TGCAGTTGATGTTGCAGCCTTGCAGGTGGAAGAGAAGGCTTACTTGTAAA
TCATTTCCCATCCTTGTGAAAATATTTTGAATAGTATCCCCAATAACAGG
TCCCACAACCACCGAACTGGCGTACGAAGAAGGACATGAAAACTAGCCGA
AGCGAGCAGGGGGGGAGGAAAAAACAGCACCGCCACTGAGCGCGCCCACC
AGGCCAGCCACGCCGGCGCCCGCACCGGAACCACGCGGCACCCACCGACA
CCACCAGCCACCCACCGAGCGGAGACACCTCACAGCGAAACCAGCGTAAA
ACGCGGGCGCGACCATGGCCGCCACCGCGCCGGGAGAAAGCGGTGAAGGG
CCGCGCACAGCCGCACGCGGGGGACACGGCCCCTAGACACGCAGGCCCGC
GGCGGACGCCCCGGCGCCACCAGACGGCACGACGGAGCTCGGGTGGACGG
CGGCACGCTCCCTCCACAGGCACGCGACCGGCGAGGGAGTACGGACCGCA
GCGCCGGCAAGACAGGCCACCAGGTCGACCACGACCCCCGACATACAACC
GAGGCAAGCAACGCCGACCACAATGGCCACACATC
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