EY685070

Overview
NameEY685070
Unique NameEY685070
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_HYPNA (Argininosuccinate lyase OS=Hyphomonas neptunium (strain ATCC 15444) GN=argH PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.608e-15
Identity = 42/60 (70.00%), Postives = 44/60 (73.33%), Query Frame = 3
Query:    9 VAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            + H LLAYVE LERD  RL  C VR+N CPLGA ALAGTG PIDR MTAEAL F  PM N
Sbjct:  170 LGHHLLAYVEMLERDRSRLLDCAVRLNECPLGAAALAGTGFPIDRDMTAEALGFARPMAN 229          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_THET8 (Argininosuccinate lyase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=argH PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.103e-13
Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 3
Query:    6 LVAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            L+AH  LAY E L+RDAGRL+    R+N  PLGA ALAGTG PIDR  TA  L F APMRN
Sbjct:  167 LLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGAAALAGTGFPIDRHFTARELGFKAPMRN 227          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_THET2 (Argininosuccinate lyase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=argH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.103e-13
Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 3
Query:    6 LVAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            L+AH  LAY E L+RDAGRL+    R+N  PLGA ALAGTG PIDR  TA  L F APMRN
Sbjct:  167 LLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGAAALAGTGFPIDRHFTARELGFKAPMRN 227          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_GLUOX (Argininosuccinate lyase OS=Gluconobacter oxydans GN=argH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.026e-11
Identity = 36/58 (62.07%), Postives = 39/58 (67.24%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H LLAYVE L RD GRL+    R+N CPLG+ ALAGT  PIDR MTA AL F  P  N
Sbjct:  187 HHLLAYVEMLSRDRGRLRDARARLNECPLGSAALAGTSFPIDRRMTAAALDFDRPTAN 244          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_RHOS1 (Argininosuccinate lyase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=argH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.340e-11
Identity = 36/58 (62.07%), Postives = 38/58 (65.52%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H +LAYVE L RD  R +    RMN CPLGA ALAGTG PIDR MTA AL F  P  N
Sbjct:  177 HHMLAYVEMLARDRSRFKDARARMNECPLGAAALAGTGFPIDRHMTAAALGFDRPTAN 234          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_RHOS5 (Argininosuccinate lyase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=argH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.285e-11
Identity = 36/58 (62.07%), Postives = 37/58 (63.79%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H +LAYVE L RD  R      RMN CPLGA ALAGTG PIDR MTA AL F  P  N
Sbjct:  177 HHMLAYVEMLARDRSRFADARARMNECPLGAAALAGTGFPIDRHMTAAALGFDRPTAN 234          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_BARBK (Argininosuccinate lyase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=argH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.285e-11
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H ++AYVE   RD  R++    RMN  PLGA ALAGTG PIDRFMTA+AL F  P RN
Sbjct:  173 HYMMAYVEMFGRDLSRMRDAIERMNESPLGAAALAGTGFPIDRFMTAQALGFREPTRN 230          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_RHOS4 (Argininosuccinate lyase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=argH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.984e-11
Identity = 36/58 (62.07%), Postives = 37/58 (63.79%), Query Frame = 3
Query:   15 HPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            H +LAYVE L RD  R      RMN CPLGA ALAGTG PIDR MTA AL F  P  N
Sbjct:  177 HHMLAYVEMLARDRSRFVDARARMNECPLGAAALAGTGFPIDRHMTAAALGFDRPTAN 234          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_ACICJ (Argininosuccinate lyase OS=Acidiphilium cryptum (strain JF-5) GN=argH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.984e-11
Identity = 37/60 (61.67%), Postives = 39/60 (65.00%), Query Frame = 3
Query:    9 VAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            + H LLAYVE L RD GRL     R+N CPLGA ALAGT  PIDR MTA AL F  P  N
Sbjct:  178 LGHHLLAYVEMLSRDRGRLADARRRLNECPLGAAALAGTTFPIDRSMTAAALGFDRPTAN 237          
BLAST of EY685070 vs. ExPASy Swiss-Prot
Match: ARLY_SYNSC (Argininosuccinate lyase OS=Synechococcus sp. (strain CC9605) GN=argH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.898e-11
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 3
Query:    9 VAHPLLAYVEHLERDAGRLQYCTVRMNFCPLGACALAGTGLPIDRFMTAEALQFTAPMRN 188
            +AH LLAYVE LERD  RLQ    R+N CPLGA ALAGT +PIDR  TA+ L F+A   N
Sbjct:  173 LAHHLLAYVEMLERDRERLQDARKRVNICPLGAAALAGTPVPIDRQRTAKELGFSAVYAN 232          
The following BLAST results are available for this feature:
BLAST of EY685070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ARLY_HYPNA2.608e-1570.00Argininosuccinate lyase OS=Hyphomonas neptunium (s... [more]
ARLY_THET87.103e-1363.93Argininosuccinate lyase OS=Thermus thermophilus (s... [more]
ARLY_THET27.103e-1363.93Argininosuccinate lyase OS=Thermus thermophilus (s... [more]
ARLY_GLUOX1.026e-1162.07Argininosuccinate lyase OS=Gluconobacter oxydans G... [more]
ARLY_RHOS11.340e-1162.07Argininosuccinate lyase OS=Rhodobacter sphaeroides... [more]
ARLY_RHOS52.285e-1162.07Argininosuccinate lyase OS=Rhodobacter sphaeroides... [more]
ARLY_BARBK2.285e-1160.34Argininosuccinate lyase OS=Bartonella bacilliformi... [more]
ARLY_RHOS42.984e-1162.07Argininosuccinate lyase OS=Rhodobacter sphaeroides... [more]
ARLY_ACICJ2.984e-1161.67Argininosuccinate lyase OS=Acidiphilium cryptum (s... [more]
ARLY_SYNSC3.898e-1161.67Argininosuccinate lyase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685070 ID=EY685070; Name=EY685070; organism=Citrus sinensis; type=EST; length=996bp
CCTGTCTTGTTGCACATCCCCTTCTGGCATATGTTGAGCACCTTGAACGT
GATGCTGGTCGTTTACAATATTGCACAGTTAGGATGAATTTCTGCCCTCT
TGGTGCATGTGCATTGGCTGGCACTGGCCTGCCCATTGACAGGTTTATGA
CTGCGGAAGCTTTACAATTTACTGCTCCCATGAGGAACAGGTATGTGCTG
AAACAAAACGAACCTTGAATGTGGCCTTTTGATATGTCAGGGTGACAAAC
TGACAATTGAAACTATATGCTGCTGCAGTCTTTGGTATCCACTTTTTCTG
TTCCACACCATAAACCCAATTTTGTTGGCCACTTCAATTGTCAAGTCTAG
AGTATCAGCTTTTGGAATTTCCTCAACTCCACTTCAATTTGTAATCTTTA
TATATGTTTATGGTTGGAAAATGGCTGCATTATGCTATCATATGACTCGA
TTTGATCCATTCAAATATCTGGGACTTACTCTCTGAACACATCTCTTGCG
ATAAGTTGACATTCCACTTTGATTCTATAACTAAAATGTCATTTTGAAAC
GCGACCTTATTAGTTATGGACTATTCAACTACTTGAACTGAATCAACAAA
ATAACGAAGTCCATTTGTTCCCTTTTTTTTGCTCAATTCTCCTTCTCTCT
GCAACAAGGGTTCCTAGCACTGAATCAGCCAGGAACTTAGGATGCTCCAC
AACGTTACAGGTCCAATAAAGACCGCAAACTCCTTCGAAAAAACCCTTCC
TCCCATCTCCACAAAAACCTTTCCCCCTACCCGGGCCGGGGAAATCCAAG
CCAATCAGCACACTCATAACTAGACTACTTACACTCCTCCACCCGCCACC
TGCCGCGCCTCCGAACAACACCACTTCATCAGCTCCTAGCATGGAACACC
TCACTGCACCCAAAGATCACTCACACAATACACACAAACACCGATCACTC
CATCAGCCTCACACTCTCTCAAATATAACAATGTAAAACGACGACA
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