EY685068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_RAT (Exportin-1 OS=Rattus norvegicus GN=Xpo1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.343e-56 Identity = 104/207 (50.24%), Postives = 142/207 (68.60%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPLRDAGPIS 624 V ++ D + + FVPP++D VL DY RNVP ARE EVLS A I+NK G + ++P+IF+A+F+CTL MI K+FE+YPEHR FF LL+A+ +HCFPA + + Q KLV+DSIIWAF+HT RN+A+TGL +L +L+N E Q FY+TYF I Q IF+V+TDT H G +H +L ++F L E G ++ PL P+S Sbjct: 763 VSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTPLNPGSPVS 969
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_MOUSE (Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 5.219e-56 Identity = 103/207 (49.76%), Postives = 142/207 (68.60%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPLRDAGPIS 624 V ++ D + + FVPP++D VL DY RNVP ARE EVLS A I+NK G + ++P+IF+A+F+CTL MI K+FE+YPEHR FF LL+A+ +HCFPA + + Q KLV+DSIIWAF+HT RN+A+TGL +L +L+N E Q FY+TYF I Q IF+V+TDT H G +H +L ++F L E G ++ PL P++ Sbjct: 763 VSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTPLNPGNPVN 969
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_HUMAN (Exportin-1 OS=Homo sapiens GN=XPO1 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 3.383e-55 Identity = 103/210 (49.05%), Postives = 142/210 (67.62%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPLRDAGPISLSI 633 V ++ D + + FVPP++D VL DY RNVP ARE EVLS A I+NK G + ++P+IF+A+F+CTL MI K+FE+YPEHR FF LL+A+ +HCFPA + + Q KLV+DSIIWAF+HT RN+A+TGL +L +L+N E Q FY+TYF I Q IF+V+TDT H G +H +L ++F L E G ++ L P++ I Sbjct: 763 VSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTSLNPGNPVNNQI 972
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_SCHPO (Exportin-1 OS=Schizosaccharomyces pombe GN=xpo1 PE=1 SV=3) HSP 1 Score: 209.534 bits (532), Expect = 2.424e-53 Identity = 103/232 (44.40%), Postives = 152/232 (65.52%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNF--QASEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPLRDAGPISLSISKKCNEGSRMQTKDLWVLSFP 696 + +AED +G +P + + VL DY +NVPDAR++EVL+L TI+N+ + D +P + +A+F CTLEMI+K+F +YPEHR FF LLRAI +CFPAL+ + + Q KLV++SI+W+F+H R+I ETGLN+LLE++ N + N F++TY++++ Q+I VLTD+ HK GFKL L+L LF L ES +T PL D ++ + R +L V +FP Sbjct: 764 ISRAEDLELVGNTLIPALFEAVLLDYLQNVPDARDAEVLNLITTIVNQLSELLTDKIPLVLDAVFGCTLEMISKDFSEYPEHRAAFFQLLRAINLNCFPALLNIPAPQFKLVINSIVWSFKHVSRDIQETGLNILLELINNMASMGPDVSNAFFQTYYISLLQDILYVLTDSDHKSGFKLQSLILARLFYLVESNQITVPLYDPSQFPQEMNNQL--FLRQYIMNLLVTAFP 993
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_DROME (Exportin-1 OS=Drosophila melanogaster GN=emb PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.124e-49 Identity = 95/207 (45.89%), Postives = 139/207 (67.15%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYAR-NVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNF-QASEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPLRDAGPI 621 V ++ D + F+PP++D +L DY R VP ARE +VLS A I++K + + ++VP+IF+A+F+CTL+MI KNFED+P+HRL F+ LL+A+ HCF A + + Q KLV DS++WAF+HT RN+A+ GLN+L +ML+N Q FY+TYF I +IF+V+TDT H G H ++L ++F L E+ +T L GPI Sbjct: 755 VSRSNDNQLVMDNFIPPLLDAILLDYQRCKVPSAREPKVLSAMAIIVHKLRQHITNEVPKIFDAVFECTLDMINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVFDSVVWAFKHTMRNVADMGLNILFKMLQNLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFSLVENRKITVNL---GPI 958
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_DICDI (Exportin-1 OS=Dictyostelium discoideum GN=xpo1 PE=3 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 3.623e-49 Identity = 93/202 (46.04%), Postives = 140/202 (69.31%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNF-QASEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPLRD 609 + K+ D+ I F+ P+++ VLGDY N+P+ R+ EVLSL II K + +VP+I EA+F+ TL MITKNFEDYP HR+ FF+L+RAI ++ F L QQ KL++D ++WAF+HTERNI+ETGL++L E+++N + S+ N F++TY V++ +I +LTD+FHK GF L +L+ +F + E+G++ PL D Sbjct: 749 IEKSSDKQVIYSNFLQPLLEAVLGDYRTNIPETRDPEVLSLMTAIITSLKQLVHPEVPKILEAVFETTLSMITKNFEDYPYHRINFFNLIRAINSNAFTVFHNLHPQQFKLLIDCVVWAFKHTERNISETGLHILKELIENVSKNSDVANVFFKTYLVSLLNDILYILTDSFHKSGFALECDILRMMFQVVENGVVKIPLFD 950
BLAST of EY685068 vs. ExPASy Swiss-Prot
Match: XPO1_YEAST (Exportin-1 OS=Saccharomyces cerevisiae GN=CRM1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 3.181e-37 Identity = 77/202 (38.12%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 7 VRKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQAS---EFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLDESGLLTEPL 603 + KA + + K V P+++ VL DY NVPDAR++EVL+ T++ K + V I +++F+CTL+MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++ GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L L ++ PL Sbjct: 774 ISKARNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLVYDNKISVPL 975 The following BLAST results are available for this feature:
BLAST of EY685068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685068 ID=EY685068; Name=EY685068; organism=Citrus sinensis; type=EST; length=997bpback to top |