EY685059

Overview
NameEY685059
Unique NameEY685059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685059 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.135e-11
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3 
Query:  273 DDCANDDIPLPNVTGKILSKAIEYCNKHDKASKSDNLATTGI---DDYLKAWDADFVKV 440
            DDC ++ +PLPNVT KIL+K IEYC +H +A+ S   A  G    DD LKAWDADF+K+
Sbjct:   35 DDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKI 93
The following BLAST results are available for this feature:
BLAST of EY685059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SKP1A_ARATH2.135e-1155.93SKP1-like protein 1A OS=Arabidopsis thaliana GN=SK... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-C05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685059 ID=EY685059; Name=EY685059; organism=Citrus sinensis; type=EST; length=954bp
TAGAAATCAAAATCCCTAAATGCAGCTTCTAACGTTCTTGCCGTTGACAT
ACACTTTGTCTGAAACCCTCATTCTTTCCATTCTTCTACCATTCACACAT
TGCTATTGCCGTCATTCTTAATTTATTCTTCTTGTTCAGCTATCACTCTC
CTTCCTATTAAGCCTTCAATATCCTCAGATTTATTTTGTCCCCATTATTG
TCAGTCTCTTTCACTTCCTTTCAATTTTTCCCAACTAAACCCTAATTAAC
CGTTGTCAAGTGCTTGTTCGTGGATGATTGTGCCAATGACGATATCCCTT
TGCCCAACGTCACAGGTAAGATCCTCTCTAAGGCCATCGAGTACTGTAAT
AAGCATGACAAGGCATCTAAGTCCGACAATCTCGCCACTACTGGCATCGA
TGATTATCTCAAGGCTTGGGATGCTGATTTCGTCAAAGTCAATTAGGCCG
CTCTCTTTAATCTCATGCTTTAGCTACATAGCCAGAAAAGAGTGGCCAAA
GTTCATGATTTTCAAGAGGTGGCAAGGCAAAATAATAGAGATGATTGTTG
GCTTGTAATTTAAAGGAAGGATGATGCTGCTTGTCGTTTAATTGCTAGAC
TTAAAAAGGAAAGGGATGAAGCATGGTCATTACTTGAAAGACAGCCCCAT
AAGATGAAGATTTGGGCCCTACTAAATAGAAAATACATGCTGGAATTACT
CCGGCATTATTGCTAAAATGATCGAACCTAATGCGGGCTCTTTCAAACCA
ATAAAAAAATAACCAAAGGGCTGTTGGAAAAAGGAATTGCTGCTGCAAGT
TTGGCCAAAAATCTAGCAATTGAAATATTTGGATAATCTTTTGGAAGTTT
TGGTGGTAAAAATTTGTTTTCCCGGCGTCCAATCTTAAAATACTTTTTAT
GCGAGGGAAGAGGCAATGTAAACATAGCGAATTTTGCCAAATGCAGGAAA
ACCA
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