EY685050

Overview
NameEY685050
Unique NameEY685050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685050_ssr537 microsatellite EY685050_ssr537:537..548. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13598 contig Csv1_Contig13598:412..1379. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY685050 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.569e-40
Identity = 68/109 (62.39%), Postives = 86/109 (78.90%), Query Frame = 1 
Query:    1 FDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECN 327
            FDLD WRR+  T+ YH WQ +N +R LWKLGTLPPGLITF+  T PLD+ WHVLGLGYNPS++  +I  AAV+H+NGNMKPWL+I + ++R  WTKHVDYD  +++ CN
Sbjct:  448 FDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 556
[Close]
BLAST of EY685050 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.021e-38
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 1 
Query:    1 FDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECN 327
            FDL+ WRR+  TD YH WQ +N DR LWKLGTLPPGLITF+ +T  LD+ WHVLGLGYNP V+  +I  A VIHYNGNMKPWL+I + +Y++ WTK+VD +  +++ CN
Sbjct:  450 FDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGYNPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 558
The following BLAST results are available for this feature:
BLAST of EY685050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
QUA1_ARATH8.569e-4062.39Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
GLTR_ARATH8.021e-3860.55Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685050 ID=EY685050; Name=EY685050; organism=Citrus sinensis; type=EST; length=969bp
TTTGATTTGGATGAATGGAGGAGGCAAAACATCACAGACGTGTATCACAC
ATGGCAGAAGATGAATCATGACAGACAATTGTGGAAGCTGGGAACACTAC
CGCCTGGTCTTATAACATTCTGGAAACGCACATATCCCCTGGACCGTTTT
TGGCATGTGCTGGGGCTTGGATACAATCCCAGTGTCAACCAGAGGGATAT
AGAGAGGGCGGCTGTCATACACTACAATGGGAACATGAAACCATGGCTTG
AGATAAACATACCAAAGTATAGGAACTATTGGACCAAACATGTAGACTAT
GATCAATTGTATTTGCGAGAATGCAACATCAATCCATAGTCCGGGCAGAA
TTTGAAGTTTCCTGAACACTGCTTTGTTGGCCTTAAATTTTTCAAGGTCT
CTTCCATCTGTCATTGTAGATTATTGTGTTTGGAAGATAAAGCTTCTGAG
TTTAATTCTTTTCACTGTACATTTTAATTTTTGTTTTTGTTTTCTTAGGA
GGATTATAGATTTAGAGCCGTAATGCATGGAATATGTTTATTTATTTATT
TTTCCGAATCTTCAGTAACATTTTTGGAAATTTGCACCTTGTATATGTAA
ATGAGTTGAAGTTACATATATGTATTGTTTTTGGGCCCCGCAAGGACAGA
ACAAGGAAAAAGGGAAGAAACTAAAAACGAGGGGGCGGGCCGCTCTAAAA
GGATCCCAGTTTACGTAACCCGAGCATGCCAAGAGCTTAGTTCTTCCAAT
AGGGAACCAAAAATTACTTTACCATGACCGCACCTTTTAAAAACACCCGA
GAGTCGCGAAAAACCCTGACGTGCACCCACCTAATCCACGCTTGCGAAAA
CTGCCCCCCCTTTCGCCAGATGTGGTAGAATAACAAAAAAGGGGCCCACG
ACACAACCCCTCGCACAACAACACGACGGACCGCGAACGGGGGAGGGGAC
ACCGGGCCCGCGTGGGGGC
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