EY685043

Overview
NameEY685043
Unique NameEY685043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13724 contig Csv1_Contig13724:1..954. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_DANRE (Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 6.266e-67
Identity = 116/177 (65.54%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHTH+F A+++E    INPGSATGA+S++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFEAFENENKFYINPGSATGAYSALESNITPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_RAT (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 1.069e-66
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_PONAB (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.069e-66
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_MOUSE (Vacuolar protein sorting-associated protein 29 OS=Mus musculus GN=Vps29 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.069e-66
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_HUMAN (Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.069e-66
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_BOVIN (Vacuolar protein sorting-associated protein 29 OS=Bos taurus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.396e-66
Identity = 115/176 (65.34%), Postives = 143/176 (81.25%), Query Frame = 1 
Query:  109 LVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 181
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_CHICK (Vacuolar protein sorting-associated protein 29 OS=Gallus gallus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 4.062e-66
Identity = 113/176 (64.20%), Postives = 142/176 (80.68%), Query Frame = 1 
Query:  109 LVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC K+ +DYLK +  D+H++RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA+ ++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKDTYDYLKTLAGDVHVVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYHALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 181
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_XENTR (Vacuolar protein sorting-associated protein 29 OS=Xenopus tropicalis GN=vps29 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.928e-66
Identity = 115/177 (64.97%), Postives = 143/177 (80.79%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE  DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_XENLA (Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis GN=vps29 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.928e-66
Identity = 115/177 (64.97%), Postives = 143/177 (80.79%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE  DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERI 177
[Close]
BLAST of EY685043 vs. ExPASy Swiss-Prot
Match: VPS29_DICDI (Vacuolar protein sorting-associated protein 29 OS=Dictyostelium discoideum GN=vps29 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.000e-64
Identity = 106/177 (59.89%), Postives = 143/177 (80.79%), Query Frame = 1 
Query:  106 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKI 636
            + ++A+GD+H+PHR+  +P +FK +LVP KIQHI+CTGNL  KE+HDY K++  D+HI+RG+ DE T YP+TK ++IGQFK GLCHGHQ++PWGD  SLA LQRQLDVD+L++GHTH    ++  G + +NPGSATGAFS+I+ DV PSFVLMD+    + VY+Y+LIDG+VKV+KI
Sbjct:    1 MFIIAIGDVHVPHRSYGIPPEFKKLLVPEKIQHILCTGNLVSKEIHDYFKVLTSDVHIVRGDLDENTSYPDTKIVSIGQFKFGLCHGHQIVPWGDRASLAALQRQLDVDVLISGHTHVLEVFESNGKLFVNPGSATGAFSNISNDVIPSFVLMDVQSNNITVYIYKLIDGQVKVEKI 177
The following BLAST results are available for this feature:
BLAST of EY685043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
VPS29_DANRE6.266e-6765.54Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_RAT1.069e-6664.97Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_PONAB1.069e-6664.97Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_MOUSE1.069e-6664.97Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_HUMAN1.069e-6664.97Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_BOVIN1.396e-6665.34Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_CHICK4.062e-6664.20Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENTR6.928e-6664.97Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENLA6.928e-6664.97Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_DICDI1.000e-6459.89Vacuolar protein sorting-associated protein 29 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-A05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685043 ID=EY685043; Name=EY685043; organism=Citrus sinensis; type=EST; length=967bp
AGAAAACGACGACAGAGGTTTTGAATTTTGATGGGCGTTGTCAAAAGAGC
TCCTAAATAATCAAATCTCCCTGGGGTTTGAGCTGATAGTCGAACGTTGA
AGATGGTGTTGGTCTTAGCGTTGGGCGATTTGCACATACCACATAGAGCA
GCTGATTTGCCTGCCAAGTTTAAGTCCATGCTTGTTCCTGGCAAGATCCA
ACACATCGTTTGCACCGGCAATCTCTGCATCAAAGAAGTTCATGACTACC
TAAAGATTATTTGTCCTGACTTGCATATTATTCGTGGTGAATATGATGAA
GAGACACGATATCCTGAGACCAAAACGCTAACTATTGGTCAATTCAAACT
AGGACTGTGCCATGGTCATCAGGTTATTCCGTGGGGGGACCTAGACTCAC
TAGCCATGTTACAGAGGCAGCTGGATGTAGACATACTTGTGACTGGTCAC
ACTCATCAGTTTACTGCTTATAAACACGAGGGAGGTGTGGTTATAAACCC
AGGTTCTGCCACCGGTGCTTTCAGCAGCATCACCTACGATGTTAATCCAA
GTTTCGTCCTCATGGATATCGATGGCCTGCGGGTTGTGGTCTATGTTTAT
GAACTCATTGATGGGGAGGTTAAAGTTGACAAGATTTGATTTTAAGAAAA
CCAGCACCTGTCCCTCTGCCTCCTTACAAACAATGCTCCGAATTTCAATT
TTGGTGGAACGGCTCTCCGGATCCCCCTATTTGGGGTGATCCTGCTATAA
TTGGATTCCCTTCTCCTGGCGGGGGCTGGGAAGATTTTGGGTTAGAGAAC
CGAACAAAAGAGACGACGCTACAGAGCAACAACACGAGCGACACAAGACA
GCAAATGGTAGTGGAAAGCGTGAGCAGAGAATACTCAAGAGAGCGAAAAC
GAGAACAAATGGGGGGGGACGCCTGCCAAAGACCGTGCCGGAGTGCCTTG
GACGGAGGGCTAGGGGC
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