EY685037

Overview
NameEY685037
Unique NameEY685037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8823 contig Csv1_Contig8823:1..962. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY685037 vs. ExPASy Swiss-Prot
Match: YWOC_BACSU (Uncharacterized isochorismatase family protein ywoC OS=Bacillus subtilis GN=ywoC PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.462e-15
Identity = 55/140 (39.29%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   15 TALIIVDLQKGIAEYPFIHPIGGVVERSRALLDAFRERGMPVVLVNVTGFAPG------RTERPRR--SDVFPPGWADLLPELDQQPGDIGVTKRTWGAFASTDLEAQLKALXXXXXXXXXXXXXXXVESTARQAYEAGF 410
            TAL+I+DLQKGI     I   G VV  ++ L+D FR+    +  VNV  F  G      +T+ P +  S   P  WA+ +PE+  Q GD  VTKR WGAF  TDL+ QL+                 VESTAR+A++ G+
Sbjct:   12 TALVIIDLQKGIVP---IDQSGQVVPNAKKLVDEFRKHNGFISFVNVA-FHDGADALKPQTDEPAQGGSGEMPADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGY 147          
BLAST of EY685037 vs. ExPASy Swiss-Prot
Match: YECD_ECOLI (Isochorismatase family protein yecD OS=Escherichia coli (strain K12) GN=yecD PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.134e-13
Identity = 55/146 (37.67%), Postives = 68/146 (46.58%), Query Frame = -3
Query:    3 TALIIVDLQKGIAEYPFI---HPIGGVVERSRALLDAFRERGMPVVLVNVTGFAPGRTER-------PRRSDVFPPGWADLLPELDQQPGDIGVTKRTWGAFASTDLEAQLKALXXXXXXXXXXXXXXXVESTARQAYEAGFNVTL 410
            TAL+++DLQ+GI   PF    H    VV R+  L   FR  G PV LV V G++    E        P  + V P  W      L     DI + KR WGAF  TDLE QL+                 VESTAR A+E GFN+ +
Sbjct:    9 TALVVIDLQEGIL--PFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRV-GWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVI 151          
BLAST of EY685037 vs. ExPASy Swiss-Prot
Match: YECD_ECO57 (Uncharacterized isochorismatase family protein yecD OS=Escherichia coli O157:H7 GN=yecD PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.134e-13
Identity = 55/146 (37.67%), Postives = 68/146 (46.58%), Query Frame = -3
Query:    3 TALIIVDLQKGIAEYPFI---HPIGGVVERSRALLDAFRERGMPVVLVNVTGFAPGRTER-------PRRSDVFPPGWADLLPELDQQPGDIGVTKRTWGAFASTDLEAQLKALXXXXXXXXXXXXXXXVESTARQAYEAGFNVTL 410
            TAL+++DLQ+GI   PF    H    VV R+  L   FR  G PV LV V G++    E        P  + V P  W      L     DI + KR WGAF  TDLE QL+                 VESTAR A+E GFN+ +
Sbjct:    9 TALVVIDLQEGIL--PFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRV-GWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVI 151          
BLAST of EY685037 vs. ExPASy Swiss-Prot
Match: Y4030_CLOAB (Uncharacterized isochorismatase family protein CA_P0030 OS=Clostridium acetobutylicum GN=CA_P0030 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.144e-12
Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = -3
Query:   12 TALIIVDLQKGIAEYPFIHPIGG-VVERSRALLDAFRERGMPVVLVNVTGFAPGRTERPRRSDVF-----PPGWADLLPELDQQPGDIGVTKRTWGAFASTDLEAQLKALXXXXXXXXXXXXXXXVESTARQAYEAGFN 410
            TAL+++DLQKGI         G  VVE++  L+ AF ++G  VVLV V+        +P+          P GW   +PE+        +TKR WGAF  TDL+ QL+                 V++TAR+A++ G+N
Sbjct:    9 TALVVIDLQKGIVAGEHAPYTGKEVVEKASKLVKAFTDKGAFVVLVKVSTIDGKDMLKPKLDSEINQIKRPEGWDSYVPEISNIKNTYAITKRQWGAFYGTDLDLQLRRRGIDTMVLCGISTGIGVDTTAREAFQHGYN 147          
The following BLAST results are available for this feature:
BLAST of EY685037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YWOC_BACSU2.462e-1539.29Uncharacterized isochorismatase family protein ywo... [more]
YECD_ECOLI5.134e-1337.67Isochorismatase family protein yecD OS=Escherichia... [more]
YECD_ECO575.134e-1337.67Uncharacterized isochorismatase family protein yec... [more]
Y4030_CLOAB1.144e-1233.81Uncharacterized isochorismatase family protein CA_... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685037 ID=EY685037; Name=EY685037; organism=Citrus sinensis; type=EST; length=961bp
GCCAGGGTCACGTTGAAGCCGGCCTCGTAGGCCTGGCGCGCGGTGGACTC
CACGCCGGTCCCGGTAGCAACGCCGGTGATCACCACTTGGGTCACGCCGA
GTGCTTTGAGTTGCGCCTCAAGATCGGTGCTGGCGAAGGCGCCCCAGGTG
CGTTTGGTCACCCCAATGTCGCCGGGTTGCTGATCGAGTTCGGGCAACAG
GTCGGCCCATCCTGGTGGAAACACATCACTGCGCCGTGGCCGCTCGGTGC
GCCCGGGGGCGAAGCCTGTGACGTTGACCAGCACCACCGGCATGCCGCGC
TCGCGGAAAGCGTCGAGCAGTGCACGGGAGCGTTCCACCACGCCGCCGAT
GGGGTGGATGAACGGGTATTCGGCGATGCCTTTCTGCAAGTCCACGATGA
TCAGCGCGGTGTTGGGATCCAGCAAGGTGACGGCCATGGAATGTCCTCGA
AAGGGTAGGGCGGTTCAAATATCAACGAGGCGCTCCTGCAGCTTTACCGC
TGCCGCGAGTTCAACTTGCTCTTCGGGAGATGGTTGCTCCTGAAGCGCCC
GGAGAAGCCAATCCTGCTTGGGCTGGGGGGCGAGAGGAGGGGTGTTTCTA
ACTGGCGGGGAGCCTCATCACATTAGCTGACGGGGTGCAATGCGGTGTGG
GACGGCCCACCGCATACCCCTGCACCCCCTCGACCCCGTCTAGACCCTCA
TCTCCCCCTTGGCGCACCCTAACTGAGGTGACTATATGCCCCGCCCAACT
GACGAGAGCCGAACCGGACACAGCGAGAGGAAACAGCCATTGAACCGACG
CACACAGGATTAAGATGTATTGACGCGAAACGAGAAAACGGCGGTGGGAT
ATGAGGTGATAATGAGACACAGGTGAGATAATATACGTACGGGGAAGTAC
CGCCGCAAGAGAGATCACGACGAACGCGGCGAGGATGCACCGAGTGCCAG
TCCCAGACAAG
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