EY685016

Overview
NameEY685016
Unique NameEY685016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685016 vs. ExPASy Swiss-Prot
Match: CDC45_DICDI (Cell division control protein 45 homolog OS=Dictyostelium discoideum GN=cdc45 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.713e-28
Identity = 77/210 (36.67%), Postives = 118/210 (56.19%), Query Frame = 2
Query:    5 KRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLES----FVTSDGSCASKQFGVAYDALSLSNLDQLKTGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKLEDSADTKFLGYPQALTKFCYFLMDALKEKGARMKPLVCACLAQEPNKVLIVGVCGKPRLGALRGNAFGVSFRNAATENLGLSFSTSSFN 622
            K+++K       P++GL + Y+ SFL+ +  +S +SA+D VY VTAL+ES       SD     + F  AYD++S  N+D LK G++Q+I++Q+ I RQ ++ I K   I SG  FR+  + +S+D K+  +P ALTK   F+MDA    G   +P +   L +  N  LIVG+ G      ++ N FG  FR +A E    +F   SF+
Sbjct:  409 KKQLKQLLAINGPKFGLVNLYFNSFLKKYSNNSEISASDTVYAVTALMESDNLESDQSDQDIWEQNFWEAYDSISNKNIDLLKIGLKQSIQLQKEITRQVTSMIEKRSVILSG-PFRYAFITESSDLKYFIHPLALTKLGLFMMDAFISMGKAKRPFLIGALNENKNSYLIVGISGSHSTD-IQSNTFGEYFRKSA-EYTDATFKYQSFD 615          
BLAST of EY685016 vs. ExPASy Swiss-Prot
Match: CDC45_SCHPO (Cell division control protein 45 homolog OS=Schizosaccharomyces pombe GN=sna41 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18
Identity = 63/201 (31.34%), Postives = 99/201 (49.25%), Query Frame = 2
Query:    2 VKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLE--------------------------SFVTSDGSCASKQFGVAYDALSLSNLDQLKTGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKLEDSADTKFLGYPQALTKFCYFLMDALKEK-----GARMKPLVCACLAQEPNKVLIVG 511
            +K+ +K   +RF P YGL D  + SF R +G+   +SA+DV Y ++ALLE                           F  +        F  AYDAL   ++D L+  ++ A+ +QRAI+R G   +++  AI++ R FR+  + +  D K   +P ALTK   ++ +A+ E+       R  PLV A   +E N+ LIVG
Sbjct:  373 LKKTLKSSLKRFAPFYGLDDVIFHSFTRTYGFKCTLSASDVSYAISALLEMGNTGVLLQSKTVARSPDMTEEEYLEKFENAQNQEWLHNFYDAYDALD--DVDSLERALKLAMHLQRAIVRTG-ITLLEKRAIKTLRSFRFGLINEGPDLKIFMHPLALTKMSLWIAEAINEQEREFGKLRHLPLVLAAFVEEKNRYLIVG 570          
BLAST of EY685016 vs. ExPASy Swiss-Prot
Match: CC45L_XENLA (CDC45-related protein OS=Xenopus laevis GN=cdc45l PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 62/217 (28.57%), Postives = 105/217 (48.39%), Query Frame = 2
Query:    2 VKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVTSDGSCASKQFGVAYDALSLSNLDQLKTGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKLEDSADTKFLGYPQALTKFCYFLMDAL----KEKGARMKPLVCAC-LAQEPNKVLIVGVCGKPRLGALRGNAFGVSFRNAATENLGLSFSTSSFNLHGSF 637
            +K  +++  E    ++G+ D   ++F    G+ ++  A+D+V+ V +LLE+  T      +  F  A D+LS SNLD+L TG++   K+  AI +  ++ I  +  +  G       +E + D K    P +L   C +L+ +     K K  ++ PLV A  L  E   V++VG+  +    + + N FG +F  AA        STSS  LH  F
Sbjct:  337 LKENLREMLEESANKFGMKDVRVQTFSVQFGFKNKFLASDIVFAVLSLLEN--TERDEKGTDNFIKALDSLSRSNLDKLHTGLEMGKKLLCAIQQTVASCICTNLILSQGPFLYCYLMEGTPDVKMFSNPISLCLLCKYLLKSFVCSTKNKRCKLLPLVLAAPLDAEKGTVIMVGIPPEAE-SSDKKNFFGRAFEKAAE-------STSSRTLHNHF 543          
The following BLAST results are available for this feature:
BLAST of EY685016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CDC45_DICDI6.713e-2836.67Cell division control protein 45 homolog OS=Dictyo... [more]
CDC45_SCHPO6.298e-1831.34Cell division control protein 45 homolog OS=Schizo... [more]
CC45L_XENLA9.411e-1428.57CDC45-related protein OS=Xenopus laevis GN=cdc45l ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-F03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685016 ID=EY685016; Name=EY685016; organism=Citrus sinensis; type=EST; length=899bp
AGTAAAACGGAAGATGAAAGATGAATTTGAAAGGTTTCTACCTGAATATG
GGCTTACTGATTTCTATTACCGGAGTTTCCTGAGGCTACATGGTTACAGC
TCCAGGGTATCTGCTGCGGATGTGGTGTATGGAGTTACGGCACTGCTTGA
GTCATTTGTAACTTCTGATGGCTCTTGTGCTTCAAAGCAATTTGGGGTGG
CATATGATGCATTATCACTGAGCAATCTTGATCAGTTGAAAACTGGAATG
CAGCAGGCAATTAAGGTACAGAGAGCAATACTTAGGCAAGGAAGTGCAGC
CATTATGAAGAGCGGAGCTATTAGAAGCGGACGGAAATTCAGGTGGGTTA
AGCTTGAAGATTCAGCGGATACAAAATTTTTGGGGTACCCCCAGGCTTTA
ACTAAATTCTGCTATTTTTTAATGGATGCATTGAAAGAGAAGGGAGCTAG
AATGAAGCCTCTGGTATGTGCCTGCTTAGCACAAGAACCAAATAAAGTGT
TGATTGTCGGGGTTTGTGGGAAGCCTCGACTTGGCGCCCTCCGAGGAAAT
GCATTTGGGGTTTCCTTCAGAAATGCAGCTACCGAGAATTTGGGACTGAG
TTTTTCCACGAGCTCTTTTAATCTTCATGGATCATTCTTAACTAGAAGAA
GAAGTTGATTTCCTTTGGTGGTTAGATTAGCGGATAAGGCTATCAAGAAA
CAATTAACGTCTCCCAAACGCAGGCGGACACATGAGGGATTCACTATCTC
TGTCCGCACGTACCAGAGAACCCATAAGTTCAGCCCTAAGAAAACCCTTC
ATGCAAGAGGCACCACGCTCGCACACACCAGCCGTGAAAAAGAACACCGA
CAACACCAACTCTAAGTACACACCGAGCCGCCACCAGGCCAAGAACGAC
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