EY684984

Overview
NameEY684984
Unique NameEY684984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadI PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.039e-17
Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = -3 
Query:   39 SLQRWSPAYKQGLVDDSI-----SPYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAV 323
            S Q+   A++ G + D +      PY+  L RDNN+R D+ +EKLA L P +DR++G++TA NSTPLTDGAS V++ +E+ A E GLPVL YLR+   AA+
Sbjct:  209 SHQKAHAAWEAGWLSDEVMTAYPEPYKKHLSRDNNIRGDSQIEKLAKLKPVFDRKHGSVTAANSTPLTDGASAVMMMTESRAKELGLPVLGYLRSYAFAAL 309
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPY (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPB (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDS-----ISPYR-GLXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QG + D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+   +A++
Sbjct:  209 SHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAID 310
[Close]
BLAST of EY684984 vs. ExPASy Swiss-Prot
Match: FADI_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.446e-16
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = -3 
Query:   36 SLQRWSPAYKQGLVDDSIS-----PYRG-LXRDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAAVN 323
            S Q  + A++QGL+ D +      PYR  +  DNN+R D+SL   A L PA+DR++G++TA NSTPLTDGA+ VL+ SE+ A E GL  L YLR+   +A++
Sbjct:  209 SHQLAAKAWEQGLLHDEVMTAYVPPYRTQISEDNNVRKDSSLASYAKLKPAFDRKHGSVTAANSTPLTDGAAAVLMMSESRAKELGLQPLGYLRSFAFSAID 310
The following BLAST results are available for this feature:
BLAST of EY684984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
FADI_IDILO1.039e-1748.513-ketoacyl-CoA thiolase OS=Idiomarina loihiensis G... [more]
FADI_YERPY5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPS5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPP5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADI_YERPN5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERPE5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI... [more]
FADI_YERPB5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPA5.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERP35.701e-1647.063-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_SERP57.446e-1647.063-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-C01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684984 ID=EY684984; Name=EY684984; organism=Citrus sinensis; type=EST; length=883bp
CTTGCAGAACGGGTCCCGGAATTCCGGGTCGACGAATTCACCGCTGCGGT
TTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGGCAGCCC
ATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGGGGCGTG
GAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGGGGACAG
GCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGTCCCGGG
NCAGGCCGCGATACGGGCTGATCGAATCATCGACCAAACCCTGCTTGTAA
GCCGGCGACCACCGCTGGAGACTAACTCAGGGCAAAGAAACCAAACCGCA
CCGAACTACCAACCACCACCCCCCCACACGCCCCAAACCACCCACACACA
CCCGACGGGAGACACACGGCAGAAAACCACCAACAGAGAGGAGGGGGGGG
GGGGGGAGTTCGAAGAAGACGGGTCAGTCCGCAGAACCGCGAAGCACTAA
AGCCAAACGTCTCACGCCGGCCCGCGCCTGCCACGCGACGAGGCACCACC
GACGCGGACCGCCCGCACAACCTGACTTAGAAAAACGAAATCATAAAAGA
CCAATGTATAACGGAAAAGAGGCAAGCGGCACTAGTCCGGCCCCCAGCCC
AGACCGTAAGACACCGTACCACCAAAGCCCCTCGAGCCCCCACCCCTCGG
AGGGGGCGGAAAGACAGACCCGCACCCCACCCCCCGCCCCCTCCGAGAAC
GACAGCCTGTCGGCAAGCCCGGCACCCGCCACCTCCGAACGAGGCCGCGC
TCACAAGGAACCGACAACCACAGGACCGCGCACCCGCCCCGGCGCCCACT
TCCCGAACACCGCCCCCACACGCGACAGGAAAA
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