EY684938

Overview
NameEY684938
Unique NameEY684938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684938_ssr483 microsatellite EY684938_ssr483:483..494. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.485e-114
Identity = 201/231 (87.01%), Postives = 219/231 (94.81%), Query Frame = 3
Query:   24 NTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNITP 716
            +T+S+GKLTSLDQYISRMK+GQKDIFYITG +KEQLEKSPFLERL KKNYEVI FTDPVDEYLMQYLMDYEDKKFQNVSKEGLK+GKD+KDKELKESFKELTKWWKGALASENVDDVK+SNRL NTPCVVVTSKYGWS+NMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD ED  V+QTA+L YQTAL+E+GF LNDPK+FAS IY +VK++L I+P
Sbjct:  548 STKSEGKLTSLDQYISRMKSGQKDIFYITGTSKEQLEKSPFLERLTKKNYEVILFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKIGKDSKDKELKESFKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKISP 778          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 399.438 bits (1025), Expect = 1.350e-110
Identity = 193/230 (83.91%), Postives = 214/230 (93.04%), Query Frame = 3
Query:   27 TQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNITP 716
            T+SDGKLTSLDQYI RMK  QKDIFYITG++KEQLEKSPFLERL KK YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLK+GKD+KDKELKE+FKELTKWWKG LASENVDDVK+SNRL +TPCVVVTSK+GWSANMERIMQSQTLSDA+KQAYMRGKRVLEINPRHPIIKEL++R+  DPED  V++TAQL YQTAL+E+GF L DPKDFA+RIY +VK+ LNI+P
Sbjct:  545 TKSDGKLTSLDQYIKRMKKSQKDIFYITGSSKEQLEKSPFLERLIKKGYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKVGKDSKDKELKEAFKELTKWWKGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNISP 774          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 2.088e-103
Identity = 179/231 (77.49%), Postives = 213/231 (92.21%), Query Frame = 3
Query:   24 NTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNITP 716
            +++SDGKL SLD+YISRMK+GQKDIFY+TG++KEQLEKSPFLE+L KKNYEVI+FTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKD+K K+LKESFKELT WWK AL +E +D VK+SNRL NTPCVVVTSKYGWS+NME+IMQ+QTLSDASKQAYMRGKRVLEINPRHPIIKELR++V +D +  G++QTA+L YQTAL+E+GF+L DPKDFAS IY +V+ +L+++P
Sbjct:  541 SSKSDGKLVSLDEYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSP 771          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 1.015e-57
Identity = 116/235 (49.36%), Postives = 160/235 (68.09%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNIT 713
            Y + S  ++TSL  Y+SRMK  QK I++ITG ++E +  S F+ER+K++ +EVI+ TDP+DEY +Q L +Y+ KK  +V+KEGL+L +  ++K    E K  F+ L K  K  L  + V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H +IK LRERV  D  D  V+    L ++TALL +GFSL DP+  ASRIY  +K  L+IT
Sbjct:  448 YTSASSEEMTSLKDYVSRMKENQKQIYFITGESREAVASSAFVERVKRRGFEVIYMTDPIDEYCVQQLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDIL-EKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGLDIT 681          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.015e-57
Identity = 114/235 (48.51%), Postives = 163/235 (69.36%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            Y+T+S  +LTSL  Y++RMK GQKDI+YITG +K+ +E SPFLERLKKK YEV+F  D +DEY +  L +Y+ KK  + +KEGLKL  D +++     E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  +YM  K+ +EINP + I++ELR+R   D  D  V+    L ++TALL +GFSL+DP  F +RI+  +K  L+I
Sbjct:  442 YSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREEKKKSFENLCKIIKDILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSI 675          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.732e-57
Identity = 113/235 (48.09%), Postives = 164/235 (69.79%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDT-----KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++T+S  ++TSL  Y++RMK GQKDI+YITG +K+ +E SPFLERLKKK YEV++  D +DEY +  L +Y+ KK  + +KEGLKL  D+     K +E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  +YM  K+ +EINP + I++ELR+R   D  D  V+    L ++TALL +GFSL+DP  FA+RI+  +K  L+I
Sbjct:  238 HSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDDSEEEKKKKEEKKKSFENLCKIIKDILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSI 471          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 6.582e-57
Identity = 111/235 (47.23%), Postives = 163/235 (69.36%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK-----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++T+S  ++TS   Y++RMK GQKDIFYITG +K+ +E SPFLERLKK+ YEV++  D +DEY +  L +Y+ KK  + +KEGLKL  +T+++     E K+SF+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I++ELR+R   D  D  V+    L Y+TALL +GFSL++P  FA+RI+  +K  L+I
Sbjct:  438 HSTKSGDEMTSFKDYVTRMKEGQKDIFYITGESKKAVENSPFLERLKKRGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDETEEEKKKREEKKKSFENLCKTIKEILG-DKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLDEPNTFAARIHRMLKLGLSI 671          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.582e-57
Identity = 111/238 (46.64%), Postives = 163/238 (68.49%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V++V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.596e-57
Identity = 113/236 (47.88%), Postives = 162/236 (68.64%), Query Frame = 3
Query:   21 YNTQSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK------ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            ++T+S  + TSL  Y++RMK GQKDI+YITG +++ +E SPFLERLKKK YEV+F  D +DEY +  L +Y+ KK  + +KEGLKL  +  ++      E K+ F+EL K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S  AYM  K+ +EINP + I++ELR+R   D  D  V+    L ++TALL +GFSL+DP  FA+RI+  +K  LNI
Sbjct:  452 HSTKSGDETTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDEDDEEAKKRREERKKRFEELCKVIKDILG-DRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNI 686          
BLAST of EY684938 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 219.935 bits (559), Expect = 1.466e-56
Identity = 111/238 (46.64%), Postives = 162/238 (68.07%), Query Frame = 3
Query:   12 VLSYNT-QSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLFYQTALLENGFSLNDPKDFASRIYTTVKTNLNI 710
            +L Y+T QS  ++TSL +Y+SRMK  QK I+YITG +KEQ+  S F+ER++K+ +EV++ T+P+DEY +Q L +++ K   +V+KEGL+L +D ++K    E K  F+ L K  K  L  + V+ V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L ++TALL +GFSL DP+  ++RIY  +K  L I
Sbjct:  454 LLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEIL-DKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
The following BLAST results are available for this feature:
BLAST of EY684938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
ENPL_CATRO4.485e-11487.01Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_ARATH1.350e-11083.91Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_HORVU2.088e-10377.49Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP90_BRUPA1.015e-5749.36Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_IPONI1.015e-5748.51Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_TOBAC1.732e-5748.09Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP81_ARATH6.582e-5747.23Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HS90B_PONAB6.582e-5746.64Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HSP82_MAIZE8.596e-5747.88Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HS90B_RAT1.466e-5646.64Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684938 ID=EY684938; Name=EY684938; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGTACTCTCTTATAACACACAGTCAGATGGTAAATTGACT
AGTCTGGACCAGTACATTTCAAGAATGAAAGCTGGACAAAAGGACATCTT
TTACATTACAGGCGCCAACAAGGAACAGTTGGAAAAGTCTCCATTCCTGG
AGAGGCTTAAGAAGAAGAACTATGAGGTGATTTTCTTCACTGATCCAGTT
GATGAATACCTGATGCAATACCTGATGGATTATGAAGACAAAAAGTTCCA
AAATGTATCCAAAGAGGGTCTTAAACTTGGTAAAGACACTAAAGATAAGG
AACTTAAGGAGTCATTCAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTT
GCCAGCGAGAACGTGGATGATGTGAAAGTAAGCAACCGCTTGGATAACAC
CCCTTGCGTAGTTGTGACATCAAAGTATGGTTGGAGTGCGAATATGGAGA
GGATCATGCAGTCTCAGACTCTCTCAGATGCTAGCAAGCAAGCATATATG
CGGGGCAAGAGGGTGCTTGAAATCAATCCAAGGCATCCAATCATCAAAGA
GCTCCGGGAGAGAGTCGTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAA
CAGCCCAGCTCTTTTACCAGACGGCACTCTTGGAGAATGGCTTTTCCCTC
AATGATCCCAAGGATTTTGCCTCCCGAATTTACACAACGGTGAAAACTAA
CCTTAACATAACCCCTTGATGCGACTAGTGAAGACGCAAAAGATGTACAA
ACACACGATGCCGCACGCCTACAATCAAAAAGTCTCTCGGACGCCCGCGG
CGACGGGAGCAAAAATAATTCTCTGAAGGAAACAGAGTGACATGCGCAGA
TAGAGACAAGTGCAACAAAAAACACAA
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