EY684922

Overview
NameEY684922
Unique NameEY684922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1133 contig Csv1_Contig1133:292..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684922 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.937e-38
Identity = 80/105 (76.19%), Postives = 90/105 (85.71%), Query Frame = 2
Query:    8 SAAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVALHRVGTASVIKILNVK 322
            S AKLVAKYRPGMPILSVVVPEIKTD+FDW+CS+E+PARHSLIFRGLVPVL+AGSARAS  E+TEEAL+FA++           DSVVALHRVGTASVIKI+ VK
Sbjct:  404 STAKLVAKYRPGMPILSVVVPEIKTDSFDWTCSDESPARHSLIFRGLVPVLHAGSARASHEESTEEALDFALQHAKTKGLCKQGDSVVALHRVGTASVIKIVTVK 508          
BLAST of EY684922 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.641e-34
Identity = 76/105 (72.38%), Postives = 83/105 (79.05%), Query Frame = 2
Query:    8 SAAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVALHRVGTASVIKILNVK 322
            S A+LVAKYRPG+PILSVVVPEI +D+FDW+CSNEAPARHSLI+RGLVPVLYAGSARAS  E+TEE LEFA E           DSVVAL R G A VIKIL VK
Sbjct:  393 STARLVAKYRPGIPILSVVVPEITSDSFDWACSNEAPARHSLIYRGLVPVLYAGSARASIDESTEETLEFASEYGKKKQLCKTGDSVVALFRTGNAIVIKILTVK 497          
BLAST of EY684922 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 2
Query:    8 SAAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVALHRVGTASVIKILNVK 322
            S AKLVAKYRP +PILSVVVP + TD+FDW+CS+E PARHSLI+RGL+P+L  GSA+A+DAE+TE  LE A++           D+VVALHR+G ASVIKI  VK
Sbjct:  407 STAKLVAKYRPAVPILSVVVPVLSTDSFDWTCSDETPARHSLIYRGLIPILGEGSAKATDAESTEVILEAALKSATERALCKPGDAVVALHRIGAASVIKICIVK 511          
BLAST of EY684922 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.698e-29
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 2
Query:    8 SAAKLVAKYRPGMPILSVVVPEIKTDNFDWSCSNEAPARHSLIFRGLVPVLYAGSARASDAETTEEALEFAIEXXXXXXXXXXXDSVVALHRVGTASVIKILNVK 322
            S AKLVAKYRP +PILSVVVP + TD+FDWS S+E PARHSL++RGL+P+L  GSA+A+D+E+TE  LE A++           D+VVALHR+G+ASVIKI  VK
Sbjct:  406 STAKLVAKYRPAVPILSVVVPVLTTDSFDWSISDETPARHSLVYRGLIPLLGEGSAKATDSESTEVILEAALKSAVTRGLCKPGDAVVALHRIGSASVIKICVVK 510          
The following BLAST results are available for this feature:
BLAST of EY684922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
KPYC_TOBAC3.937e-3876.19Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH2.641e-3472.38Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYC_SOYBN1.771e-3062.86Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU5.698e-2960.95Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-C11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684922 ID=EY684922; Name=EY684922; organism=Citrus sinensis; type=EST; length=636bp
CCACGCGTCCGCTGCTAAACTGGTGGCTAAGTACAGGCCTGGCATGCCTA
TTCTATCAGTGGTTGTCCCTGAGATCAAGACTGATAACTTTGATTGGTCA
TGCAGCAATGAAGCTCCCGCAAGGCATAGCCTAATCTTTCGTGGGTTGGT
TCCAGTTTTATATGCAGGATCTGCTAGGGCCTCGGATGCGGAGACCACAG
AGGAAGCACTAGAGTTTGCTATTGAACTTGGCAAGAAAAAGGGACTCTGC
AAGAAAGGAGATTCAGTCGTGGCTCTTCACCGCGTTGGAACTGCATCAGT
AATCAAGATCTTGAACGTGAAGTGATGATCGTGGGATCATCCCGAGCTTT
TGTTTCCTTTTCACTTTTATATCCTTTTGTTATATTTTGGCGGGAAGGGG
AAATGCTGCTTTGTTATATGTCAGCATTCTCCTCTTATATTTTCCCCCGA
GAAAAAAATCATGATTAATAACTTGTGGCAAGACTCTTGAACTCGGGTTC
AGAGATTAGAGATACATAAAGCTACATTTTGATCCAAAGTGTTAATTGCT
CCGCCATTAACTTCTGTAGTTGCCGTTTTGGCTATGTTTACTGAGCCTAT
TAGGCACATTTTGCAAAAAAAAAAAAAAAAAAAGGC
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