EY684847

Overview
NameEY684847
Unique NameEY684847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1064
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684847 vs. ExPASy Swiss-Prot
Match: Y659_PASMU (UPF0192 protein PM0659 OS=Pasteurella multocida GN=PM0659 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.381e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = -3
Query:   88 EKRRRTDLGSVSFKVRDFEPDRMKVSLSLHDTPVLGWIPPDQVVAKVTAMHLFGAPAAGRRVTAKMSLSPTLAAFDRYPDYRF 336
            EK  +T++GS++F+V++F+PD +K+  + +     GW+ P  +VA V   +LFG PA  R+V A ++L P L  F +Y DYRF
Sbjct:  727 EKNNQTEIGSMTFQVQEFQPDNLKIKTTFNQAHAEGWVAPQDLVATVQLANLFGTPAQNRKVQANLTLQPLLPKFSQYADYRF 809          
BLAST of EY684847 vs. ExPASy Swiss-Prot
Match: Y2573_YERPE (UPF0192 protein YPO2573/y1143/YP_1141 OS=Yersinia pestis GN=YPO2573 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.624e-12
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = -3
Query:   79 LGSVSFKVRDFEPDRMKVSLSLHDTPVLGWIPPDQVVAKVTAMHLFGAPAAGRRVTAKMSLSPTLAAFDRYPDYRFRLN 315
            LG  +  V++FEPDR+KV L L      GW+ P ++ A +   +LFG PA  RRVT+++ L P   +F  +PDY F  N
Sbjct:  828 LGHTTVNVKEFEPDRLKVQLQLTPERQQGWVKPQELQANINVQNLFGTPAQERRVTSRLILRPMYPSFAPFPDYLFYEN 906          
The following BLAST results are available for this feature:
BLAST of EY684847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y659_PASMU6.381e-1540.96UPF0192 protein PM0659 OS=Pasteurella multocida GN... [more]
Y2573_YERPE8.624e-1241.77UPF0192 protein YPO2573/y1143/YP_1141 OS=Yersinia ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-D09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684847 ID=EY684847; Name=EY684847; organism=Citrus sinensis; type=EST; length=1064bp
GCACCGCAGTACGGTCCGGATTCCCGGGTCGACGGTGGTTTCGGCCAGGT
CTTCGGAGCTGGCTTCCTCCAGCGAGTCATTCAGGCGGAAGCGGTAATCC
GGGTAGCGATCAAAGGCCGCGAGCGTGGGGCTCAGGGACATTTTTGCCGT
GACGCGACGGCCCGCCGCCGGAGCGCCGAACAAGTGCATCGCGGTGACTT
TGGCCACCACTTGGTCCGGCGGGATCCAGCCCAGCACCGGTGTATCGTGC
AAGCTCAGGCTGACTTTCATCCGGTCCGGTTCAAAGTCGCGGACCTTGAA
GCTGACGCTGCCCAGGTCCGTGCGGCGCCGCTTCTCGCCGAATCACTTGC
AGGGCCGCGGAGCTAACAACCGATCGCCACCAATAACCTGGCACCCAGTC
GACGACGCGCGCAGCCGCCGGCGATCCGCCACCACCCGGGGGGGGGGGGG
GGGCCGCACCACCCCGCCAAAGAGCACCAGGGAGATCACACCGCCCCACA
CCCAACACCGAAACGACCCCACTAACCAGAGAACGGGCGAGCCCCGAGCC
GACCATCCTCGGCACCCGCCTACCCCCCCAGCACGCCCGCGCCCAAAACA
CCCACCAGCCACGCAATAACCCCGGACCCCACCAACCCGCCACAACCCCG
CGCCTGCCCGCCCAGCCCCCCAACAACATCTACCACGGCGCACGCCACAA
AGGCCGCACGGACGCCCGGGAAACAAAGCCAACTGGCAACACATACGACG
ACAATGCCTCGACTAGAGGCACGGAAGCAGACCAACACGTCGCACACACA
GGCCACCTGACCGCCAGGGACGGGACAACACTGGCGCACCTCCCCCAGTG
GACAGCCCCTAGCGCCCCCACTCAGGCACAGACAGGGCTAACCAAAGCGG
CACCGCCCACAACAGCTGAGACCCAACGGACGACACCAGCATCCTGCCAC
AGAGACACCAACACAACGACGGAACAACAATTACCGCACCTGACAAACAG
ATCAACACACAGCGAAACACCATGACCACCAACCAACGCGCTAACACCCA
CACTACTCTAAGGA
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