EY684843

Overview
NameEY684843
Unique NameEY684843
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.186e-36
Identity = 67/98 (68.37%), Postives = 86/98 (87.76%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNRYQ 499
            MDKV R++SEKGVVIFSKSSCC+ YAV +LFQ+LGVHP V+EID+DPE +E+EKALMR+GC+ PVPA+F+ G+L+GS NE MSLH +G+L+PLV  +Q
Sbjct:    1 MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLGCSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRS11_ARATH (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 66/97 (68.04%), Postives = 84/97 (86.60%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNRY 496
            MDKV R++SEKGVVIF+KSSCCL YAV +LFQ+LGV+P ++EID+DPE +E+EKALMR+GC+ PVPAVFI G+LVGS NE MS+H + +L+PLV  Y
Sbjct:    1 MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRLGCSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.267e-33
Identity = 65/100 (65.00%), Postives = 84/100 (84.00%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNRYQPF 505
            MDKV R++SEKGVVIF+KSSCCLCYAV ILF++L V P ++EID DP+ +E+EKAL+R+GC   VPAVF+SG+LVGS N+ MSLH +G+L+PL+  YQ F
Sbjct:    1 MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLGCANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQSF 100          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRC13_ARATH (Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.267e-33
Identity = 64/98 (65.31%), Postives = 83/98 (84.69%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNRYQ 499
            MDKV R++SEKGVVIF+KSSCCLCYAV ILF++L V P ++EID DP+ +E+EKAL+R+GC+  VPAVF+ G+LVGS NE MSLH +G+L+PL+  YQ
Sbjct:    1 MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLGCSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQ 98          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1.1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMR-MGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLV 487
            MD+V RLA+++ VVIFS SSCC+C+ V  LF ELGV+P V E+D+DP GKEMEKAL R +G +  VPAVFI G+LVGS ++ MSLH +GNL+PL+
Sbjct:    1 MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLL 95          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRC14_ORYSJ (Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.507e-25
Identity = 55/95 (57.89%), Postives = 74/95 (77.89%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMR-MGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLV 487
            MD+V +LASE+ VVIF+ SSCC+C+ V  LF +LGV+ +V+E+DQDP GKEME+AL++ +G   PVP VFI G+LVG  N+ MSLH  G LIP++
Sbjct:    1 MDRVMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQDPRGKEMERALLKLLGRGPPVPVVFIGGKLVGGTNKIMSLHLGGELIPML 95          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRXS7_ARATH (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.528e-25
Identity = 50/96 (52.08%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNR 493
            M+K+ ++ SEK +VIFSK+SCC+ + +  LF +LGV+P +YE+D+   GKE+E+AL ++GC+  VP VFI GQLVG  N+ MSLH N +LIP++ R
Sbjct:    1 MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKR 96          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.528e-25
Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNR 493
            MDK+ ++ SEK VVIFSK+SCC+ + +  LF + GV+P +YE+D+   GKE+E+AL ++GC+  VP VFI GQLVG  N+ MSLH N +L+P++ R
Sbjct:    1 MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKR 96          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRXS8_ARATH (Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.244e-24
Identity = 50/97 (51.55%), Postives = 72/97 (74.23%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNRY 496
            M+K+ ++ SEK VVIFS +SCC+ + +  LF +LGV+P +YE+D+   GKE+E AL ++GC+  VP VFI GQLVG  N+ MSLH N +LIP++ R+
Sbjct:    1 MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRF 97          
BLAST of EY684843 vs. ExPASy Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.625e-24
Identity = 49/96 (51.04%), Postives = 71/96 (73.96%), Query Frame = 2
Query:  206 MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVHPMVYEIDQDPEGKEMEKALMRMGCNAPVPAVFISGQLVGSPNEAMSLHTNGNLIPLVNR 493
            MD +T++  E+ VVI+SKSSCC+ + +  L  + G +P VYE+D+   G+E+E+AL+R+GC+  VP VFI G+LVG  NE MSLH NG+LIP++ R
Sbjct:    1 MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKR 96          
The following BLAST results are available for this feature:
BLAST of EY684843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
GRXS9_ARATH9.186e-3668.37Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana ... [more]
GRS11_ARATH8.598e-3468.04Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana... [more]
GRC14_ARATH3.267e-3365.00Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14... [more]
GRC13_ARATH3.267e-3365.31Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13... [more]
GRXC1_ORYSJ1.018e-2662.11Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN... [more]
GRC14_ORYSJ2.507e-2557.89Putative glutaredoxin-C14 OS=Oryza sativa subsp. j... [more]
GRXS7_ARATH9.528e-2552.08Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana ... [more]
GRXS4_ARATH9.528e-2552.08Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana ... [more]
GRXS8_ARATH1.244e-2451.55Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana ... [more]
GRXS2_ARATH1.625e-2451.04Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684843 ID=EY684843; Name=EY684843; organism=Citrus sinensis; type=EST; length=931bp
AGCTTTAAATCCTTTTCTCCCTTGCTCACTTTTCCTTCTCTCAAATCCTT
CCTCACCATCACCACCCCGAATTCAACTAGAGTTCGGTTTGATGGTATAT
AGGTTTTAAGTGAACTCTACGTAACCCGAGGACTTCTCTGTGTTTAACAT
TTCCCGTCCCGTGATACTTCAATCTTTAAGTAAGGGAGAAGCCACTCTTA
TCGTCATGGACAAGGTGACAAGGTTGGCCTCAGAGAAAGGAGTAGTAATA
TTCAGCAAGAGCTCGTGTTGCCTCTGCTATGCAGTCAACATTCTATTTCA
GGAACTTGGTGTCCACCCTATGGTTTATGAGATTGACCAAGATCCTGAAG
GCAAGGAAATGGAGAAAGCTCTGATGAGGATGGGTTGTAACGCGCCCGTT
CCAGCAGTGTTCATTTCTGGACAGCTTGTGGGATCCCCCAATGAAGCCAT
GTCTCTCCATACTAATGGCAATCTGATTCCACTGGTGAACCGTTACCAGC
CTTTCTCATAAACCAACCTCCTCTGAATGCCACATACACACTGGCGAATA
AATACAGAGACCATTATTCATTCACAAAACCTAATAGAAGCGCACGACTC
CAACAATGGCCGAGGCGGTAAAAACTCCAGCAGACGCGAAGATTATCCAC
ACAAAACCCATAACGACGACCCACGCATAACAACCACCCCGAGCCCCTGA
ACACCCCAGGCGCCACACCCCCACTGCCCCCCCCCGCAACGCATACCCGA
CCCACACCCGCCACCGCGCAGCAACCACCGCCCAACGCAGCCCACGACGC
GCGCACTCCGACGACAATCCCTTCCCACCAACCCGCCCACAAAATCGCCG
CCACTCTCGAACCCGCACTCGCGACTAACCCCAACGGGACACAGCCAATT
CCCACCCCCCCATCCAATCCACCACAGCTCC
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