EY684771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY684771 vs. ExPASy Swiss-Prot
Match: SIN3_ARATH (Paired amphipathic helix protein Sin3 OS=Arabidopsis thaliana GN=SIN3 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21 Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 396 AQKLTTNDALTYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGQ*RTIFGVS--IPS*QRAMKSHLHFENEHPIPSNTGNIEKAIIFKNQ 701 AQKLTTNDAL YLKAVKD FQD+R KYD+FLEVMK+FK+QR+DTAGVI RVKELFKG I G + +P + + L E+ P E+AI F N+ Sbjct: 30 AQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFKGHQELILGFNTFLP---KGFEITLQPEDGQPPLKKRVEFEEAISFVNK 130
BLAST of EY684771 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.138e-14 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 3 Query: 405 LTTNDALTYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGQ*RTIFG 587 +TT DAL YLKAVKD F+D EKYD FLEV+ D K Q +DT+GVIAR+K+LFKG + G Sbjct: 304 VTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLLG 363 HSP 2 Score: 24.6386 bits (52), Expect = 6.138e-14 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 587 GFNTFLAKGYEIT 625 GFNT+L+K Y+IT Sbjct: 363 GFNTYLSKEYQIT 375
BLAST of EY684771 vs. ExPASy Swiss-Prot
Match: PST3_SCHPO (Paired amphipathic helix protein pst3 OS=Schizosaccharomyces pombe GN=pst3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.126e-12 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 405 LTTNDALTYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGQ*RTI--FGVSIPS 602 L NDAL+YL+ VK F ++RE Y+ FLE+M+DFK+Q +DT GVI RV ELF G + I F +PS Sbjct: 113 LDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIEGFNTFLPS 180 HSP 2 Score: 23.8682 bits (50), Expect = 3.126e-12 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 587 GFNTFLAKGYEI 622 GFNTFL GY+I Sbjct: 173 GFNTFLPSGYKI 184
BLAST of EY684771 vs. ExPASy Swiss-Prot
Match: SIN3A_HUMAN (Paired amphipathic helix protein Sin3a OS=Homo sapiens GN=SIN3A PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 2.514e-11 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 399 QKLTTNDALTYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGQ*RTIFG 587 Q+L DAL+YL VK F + + Y+DFL++MK+FK+Q IDT GVI+RV +LFKG I G Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMG 181 HSP 2 Score: 23.483 bits (49), Expect = 2.514e-11 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 587 GFNTFLAKGYEI 622 GFNTFL GY+I Sbjct: 181 GFNTFLPPGYKI 192 The following BLAST results are available for this feature:
BLAST of EY684771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684771 ID=EY684771; Name=EY684771; organism=Citrus sinensis; type=EST; length=854bpback to top |