EY684751

Overview
NameEY684751
Unique NameEY684751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5863 contig Csv1_Contig5863:132..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY684751 vs. ExPASy Swiss-Prot
Match: Y1089_ARATH (Uncharacterised protein At1g10890 OS=Arabidopsis thaliana GN=At1g10890 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 67/162 (41.36%), Postives = 75/162 (46.30%), Query Frame = 2 
Query:   89 RRQQEAELKLIEEETARRVEEAIRKKVEESLNSEEIKMEIQRRLEEGRKRLLDEVESQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNQMKLLGKNKSRPKLSFAFGSK 574
            RRQ+EAELKLIEEET +RVEEAIRKKVEESL SE+IKMEI   LEEGRKRL +EV +Q                                N ++V                                            + QMKLLGKNKSRPKLSFA  SK
Sbjct:  119 RRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQKEEAMRRKKAEEEEERLKQMKLLGKNKSRPKLSFALSSK 280
The following BLAST results are available for this feature:
BLAST of EY684751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1089_ARATH4.635e-2041.36Uncharacterised protein At1g10890 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-B11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684751 ID=EY684751; Name=EY684751; organism=Citrus sinensis; type=EST; length=720bp
TATGAGGACATCTGTAATAGGAAGCGTGGCATATTCTACCAAGCTAGGAA
CAGTCATTTTCCCTGTTAACTTTTTCTCTTGTATTTCCAGGCGTCAACAA
GAAGCAGAACTGAAACTGATAGAAGAAGAGACTGCTAGGAGAGTGGAAGA
GGCGATTAGGAAGAAAGTTGAAGAGAGCTTGAACTCTGAGGAGATAAAGA
TGGAAATACAAAGGCGATTGGAGGAGGGGAGGAAGAGGCTTCTCGATGAA
GTTGAATCTCAGCTTGAGAAAGAAAAGGAAGCTGCTCTTACTGAGGCTAG
AAGAAAGGAGGAGCAAGCTCGAAAAGAAAAAGAAGAATTGGAGAAAATGC
TCGAAGAGAACAGGAGGAAGGTGGAAGAATCTCAAAGAAGGGAAGCTGAG
GAGCAGCAAAGAAGAGAGGAGGAACGTTACCGTGAACTAGAACGGATACA
AAGAGAGAAAGAAGAGGCCATGCGAAGGAAGAAGCAACAAGAGGAGGAAG
AGCGGGTAAACCAAATGAAGTTGTTGGGTAAGAACAAATCCCGGCCAAAG
TTATCATTTGCCTTTGGCTCTAAATGAATTATCGAGAAACTTAATTTGAT
TTTTTCCCCCCCCCATTTTTAAGATGTTTGTGTTCGAGCTTTCATATGGT
CGATACAGTTTTTGTTACAAAAAGCTCCCATTCCTAAGCCCTAAAAAAAA
AAAAAAAAAAAAAAGGGGGG
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