EY684731

Overview
NameEY684731
Unique NameEY684731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.615e-65
Identity = 125/140 (89.29%), Postives = 133/140 (95.00%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSLIGL WSLV FRW+ EMPAII +SI+ILSDAGLGMAMFSLGLFMALQPRIIACGN +ATFAM VRFL GPAVMAAAS+AVGLRG+LLHVAIVQAALPQGIVPFVFAKEY+VHPDILSTAVIFGML+ALPITLVYYI
Sbjct:  449 TYSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMALQPRIIACGNKVATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYI 588
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN1B_ORYSJ (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica GN=PIN1B PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.615e-65
Identity = 123/140 (87.86%), Postives = 136/140 (97.14%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSL+G+ WSLVS+RW +EMPAIIARSI+ILSDAGLGMAMFSLGLFMALQPRIIACGN++A++AM VRFLVGPAVMAAAS+AVGLRG LLH+AIVQAALPQGIVPFVFAKEYNVHP+ILSTAVIFGML+ALPITLVYYI
Sbjct:  411 TYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYI 550
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.024e-63
Identity = 121/140 (86.43%), Postives = 130/140 (92.86%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSLIGL WSLV FRW+ EMPAI+ +SI+ILSDAGLGMAMFSLGLFMALQP IIACGN +AT+AM VRFL GPAVMAAAS AVGLRG+LLHVAIVQAALPQGIVPFVFAKEY+VHP ILSTAVIFGML+ALPITLVYYI
Sbjct:  452 TYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGLFMALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPSILSTAVIFGMLIALPITLVYYI 591
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.911e-62
Identity = 117/140 (83.57%), Postives = 129/140 (92.14%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSLIGL W+LV+FRWHV MP II +SI+ILSDAGLGMAMFSLGLFMALQP++IACGN++ATFAM VRFL GPAVMA A++A+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHP ILST VIFGML+ALPITLVYYI
Sbjct:  497 TYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYI 636
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.294e-61
Identity = 117/140 (83.57%), Postives = 129/140 (92.14%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSL+GL WSLV+FRWHV MPAI+ +SI+ILSDAGLGMAMFSLGLFMALQP IIACG + A  +M VRFL GPAVMAAAS+A+GLRG+LLHVAIVQAALPQGIVPFVFAKEYNVHP ILSTAVIFGML+ALPITL+YYI
Sbjct:  475 TYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYI 614
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.691e-61
Identity = 115/140 (82.14%), Postives = 130/140 (92.86%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSLIGL WSLVSFRW+++MP+II  SI+ILSDAGLGMAMFSLGLFMALQP+II+CG T+ATFAM VRFL GPAV+AA S+A+GLRG LLHVAIVQAALPQGIVPFVFAKEYN HP ILSTAVIFGML+ALPIT++YY+
Sbjct:  487 TYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYV 626
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.766e-61
Identity = 115/140 (82.14%), Postives = 129/140 (92.14%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            +YSSL G+TWSL+SF+W++EMPA+IA+SI+ILSDAGLGMAMFSLGLFMAL PRIIACGN  A FA  +RF+VGPAVM  AS AVGLRG LLHVAI+QAALPQGIVPFVFAKEYNVHPDILSTAVIFGML+ALPITL+YYI
Sbjct:  479 SYSSLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYI 618
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.869e-60
Identity = 111/140 (79.29%), Postives = 130/140 (92.86%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSL GL WSLVSF+W+++MP I++ SI+ILSDAGLGMAMFSLGLFMALQP+IIACG ++A FAM VRFL GPAV+AA S+A+G+RG LLH+AIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALP+T++YY+
Sbjct:  504 TYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPVTVLYYV 643
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.441e-60
Identity = 112/140 (80.00%), Postives = 127/140 (90.71%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSLIGL W+LV++RWHV MP I+ +SI+ILSDAGLGMAMFSLGLFMALQP+IIACGN++ATFAM VRF+ GPA+MA A +A+GL G LL +AIVQAALPQGIVPFVFAKEYNVHP ILST VIFGML+ALPITLVYYI
Sbjct:  473 TYSSLIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPAIMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIALPITLVYYI 612
[Close]
BLAST of EY684731 vs. ExPASy Swiss-Prot
Match: PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.188e-60
Identity = 116/140 (82.86%), Postives = 126/140 (90.00%), Query Frame = 2 
Query:    2 TYSSLIGLTWSLVSFRWHVEMPAIIARSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTIATFAMGVRFLVGPAVMAAASMAVGLRGSLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPITLVYYI 421
            TYSSLIGL W+LV+FRW V MP II +SI+ILSDAGLGMAMFSLGLFMALQP++IACGN+ ATFAM VRF  GPAVMA A+MA+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHP ILST VIFGML+ALPITLVYYI
Sbjct:  476 TYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFTGPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYI 615
The following BLAST results are available for this feature:
BLAST of EY684731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PIN1C_ORYSJ5.615e-6589.29Probable auxin efflux carrier component 1c OS=Oryz... [more]
PIN1B_ORYSJ5.615e-6587.86Probable auxin efflux carrier component 1b OS=Oryz... [more]
PIN1_ORYSJ4.024e-6386.43Auxin efflux carrier component 1 OS=Oryza sativa s... [more]
PIN3_ARATH9.911e-6283.57Auxin efflux carrier component 3 OS=Arabidopsis th... [more]
PIN3A_ORYSJ1.294e-6183.57Probable auxin efflux carrier component 3a OS=Oryz... [more]
PIN2_ORYSJ1.691e-6182.14Probable auxin efflux carrier component 2 OS=Oryza... [more]
PINI_ARATH3.766e-6182.14Auxin efflux carrier component 1 OS=Arabidopsis th... [more]
PIN2_ARATH1.869e-6079.29Auxin efflux carrier component 2 OS=Arabidopsis th... [more]
PIN4_ARATH2.441e-6080.00Auxin efflux carrier component 4 OS=Arabidopsis th... [more]
PIN7_ARATH3.188e-6082.86Auxin efflux carrier component 7 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684731 ID=EY684731; Name=EY684731; organism=Citrus sinensis; type=EST; length=793bp
CACATACTCCAGTCTCATTGGTCTCACCTGGTCTCTAGTTTCCTTCAGGT
GGCATGTTGAGATGCCGGCGATAATTGCTCGTTCAATAGCCATTTTGTCT
GATGCAGGGCTTGGAATGGCCATGTTTAGTCTCGGTTTATTCATGGCATT
GCAGCCAAGGATTATTGCTTGTGGAAACACAATTGCTACCTTTGCCATGG
GTGTTCGATTCCTTGTTGGTCCTGCTGTAATGGCTGCTGCCTCAATGGCC
GTTGGCTTGCGTGGATCTCTCTTGCATGTTGCCATAGTGCAGGCTGCTCT
TCCACAAGGGATTGTACCCTTTGTCTTTGCCAAGGAATACAATGTTCATC
CAGACATATTGAGCACAGCGGTCATATTTGGGATGCTAGTAGCTCTTCCT
ATTACTCTTGTTTACTACATCTTGCTTGGACTTTGAAGCCAAAGCTCTTA
GAAGCTGATAATGCAAAACTTAGTGTTAGTAGTAGAACCCATTGTGAATG
TGGGATTTTTTTTTTTTCTTTTGACTTCTTTGAATGAGGAATATACCATT
TCACAACTCTAGACAAGAGAACAAACAAGGGAAAAAACTGGGAAGAAAGG
GAACCAGCAGGTTTCCCTTTCGCCTTTCACCAAAAGGATGGCTTGTTTCT
TCGAGCACCCAACAAACACGCTTTCGTCGGAACTTCACTTCTAAAGGGCA
AGAGGGGGGCAAACTTTCTCGTGCGCGTTCTTGGGCTGCGCACCGCAGGC
AAGGCATTAAGAGTACTAGAAAAGTGGGGTGACGCGCCAAAAC
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