EY684690

Overview
NameEY684690
Unique NameEY684690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684690_ssr78 microsatellite EY684690_ssr78:78..92. BLAST: Citrus ESTs to Prunus persica proteins V1
EY684690_ssr180 microsatellite EY684690_ssr180:180..191. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.252e-47
Identity = 97/167 (58.08%), Postives = 110/167 (65.87%), Query Frame = 3
Query:  219 NFLSPKPVPMKTVGCP----------PPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKHPDPGIRKLTSSKDPESRISGN 689
            N LSPKP+ MK  G            P KP KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RGDFARLNFPNLRHNGSHIGG+FGEYKPLHSSVDAKL AIC+++AETQK    K  K S   +KK   P + +   +++    I G+
Sbjct:  119 NLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK--QDKSTKSSKKREKKVSSPDLSEKVKAEENSVSIGGS 283          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.604e-37
Identity = 85/150 (56.67%), Postives = 98/150 (65.33%), Query Frame = 3
Query:  225 LSPKPVPMKTVGCPPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAET--QKLGTSKK---EKQSNSAQKKHPDPGIRKLTSS 659
            LSPKPV MK  G    KP KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RGDFARLNFP+LRHN         EY+PL SSVDAKL AIC+NLAET  +++ ++KK    K+S++   K P+       SS
Sbjct:   62 LSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHN--------DEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSSRKRSSTVAVKLPEEDYSSAGSS 203          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.326e-31
Identity = 77/165 (46.67%), Postives = 93/165 (56.36%), Query Frame = 3
Query:  225 LSPKPVPMKTVGCPPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKHPDPGIRKLTSSKDPESRISGNKRTAIQSPHS 719
            L+PKPVPMK +        KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDT               RG+FARLNFP  RH   + GG    + PLHSSVDAKL  IC++L +T+ +     E +    + ++ +     L S    E+  S        SP S
Sbjct:   77 LAPKPVPMKNMTAQ-----KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGG-SCFNPLHSSVDAKLQEICQSLRKTEDIDLPCSETELFPPKTEYQESEYGFLRSD---ENSFSDESHVESSSPES 232          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.058e-28
Identity = 80/190 (42.11%), Postives = 96/190 (50.53%), Query Frame = 3
Query:  216 LNFLSPKPVPMKTVGCPPP----KPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKHPDPGIRKLTSSKDPESRISGNKRTAIQSPH--SCRTDDPGLPNSEAPTQ 767
            LNF+ P      T   P      KPAKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RGD ARLNFP LR+       + GEY P+ ++VDAKL AI   LAE +                    PG  + TS K  ++  S  ++ +    H  S  +D  G P S+   Q
Sbjct:  115 LNFIEPSQPGFMTQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAI---LAEPKN------------------QPGKTERTSRKRAKAAASSAEQPSAPQQHSGSGESDGSGSPTSDVMVQ 283          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26
Identity = 62/118 (52.54%), Postives = 73/118 (61.86%), Query Frame = 3
Query:  225 LSPKPVPMKTVGCPPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKL 578
            LSP  + MK +     K   LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTF+T               RGD A+LNFPNL H          +  PL SSVD KL AIC++L +T+++
Sbjct:   50 LSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHE---------DMNPLPSSVDTKLQAICKSLRKTEEI 158          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 3
Query:  213 GLNFLSPKPVPMKTVGCPPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIGGEFGEYKPLHS-SVDAKLAAICEN----LAETQKLGTSKKEKQSNSAQKKHPDPG 638
            G + L+ KP  MK +     KP KLYRGVRQR WGKWVAEIRLPKNRTRLWLGTF+T               RGD ARLNFP++           G YK + S S++AK+ +IC +    L + +K   +++     S  +K P+ G
Sbjct:   87 GSHLLTAKPTSMKKIDVAT-KPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVRQ--------GHYKQILSPSINAKIESICNSSDLPLPQIEKQNKTEEVLSGFSKPEKEPEFG 224          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23
Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  273 KPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRHNGSHIG-GEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKHPDPGIRKLTSSKDPESRISGNKRTAIQSPHSCRTDDPGLPNSE 755
            K  KLYRGVRQRHWGKWVAEIRLP+NR R+WLGT+DT               RG++ARLNFPNL+     +G G+  +   L ++VD K+ +IC+ + + +   + K  K S++            L+S +   S       TA+ S  S      GL NSE
Sbjct:  131 KKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADS------SCLSSPEILSSSPVTTTTTAVTSEDSYWVSPMGLCNSE 286          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19
Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 3
Query:  276 PAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNLRH 470
            P KLYRGVRQRHWGKWVAEIRLP+NRTR+WLGTF+T               RG+FA LNFP+L+H
Sbjct:  228 PTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPDLKH 292          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.424e-17
Identity = 44/70 (62.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  264 PPPKP---AKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFPNL 464
            PP +P    KLYRGVRQRHWGKWVAEIR P+NRTRLWLGTFDT               RG+ ARLNFP L
Sbjct:  176 PPVQPFSATKLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPEL 245          
BLAST of EY684690 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13
Identity = 41/81 (50.62%), Postives = 46/81 (56.79%), Query Frame = 3
Query:  225 LSPKPVPMKTVGCPPPKP---AKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDFARLNFP 458
            LSP+   M  +     +P    KLYRGVRQR WGKWVAEIR P++R RLWLGTFDT               RG  A LNFP
Sbjct:  119 LSPRGRMMMMMSQEAVQPYIATKLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP 199          
The following BLAST results are available for this feature:
BLAST of EY684690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
RAP24_ARATH2.252e-4758.08Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF58_ARATH3.604e-3756.67Ethylene-responsive transcription factor ERF058 OS... [more]
ERF60_ARATH1.326e-3146.67Ethylene-responsive transcription factor ERF060 OS... [more]
ERF55_ARATH3.058e-2842.11Ethylene-responsive transcription factor ERF055 OS... [more]
ERF56_ARATH1.678e-2652.54Ethylene-responsive transcription factor ERF056 OS... [more]
ERF57_ARATH3.868e-2343.54Ethylene-responsive transcription factor ERF057 OS... [more]
ERF61_ARATH6.598e-2339.51Ethylene-responsive transcription factor ERF061 OS... [more]
ERF62_ARATH3.389e-1964.62Ethylene-responsive transcription factor ERF062 OS... [more]
ERF53_ARATH1.424e-1762.86Ethylene-responsive transcription factor ERF053 OS... [more]
ERF54_ARATH2.128e-1350.62Ethylene-responsive transcription factor ERF054 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684690 ID=EY684690; Name=EY684690; organism=Citrus sinensis; type=EST; length=767bp
CCACGCGTCCGGATGCGTGCTCCACGTCGTCAACTCATCTATTTGCTAAT
GGGTTGTCGATGAATGACTTAGGTCTCCAGCAGCAGCAGCAGCATTATCA
ACAGGGCACTGTTGGGCTAAATAACCTTAACCTATTCCAGATTCAGCAGA
TCCAGCTTCAAAATCAAAACTTTTGGCCACAGCAGCAGCAGAAAAGTCAT
CTTTACCCTCAGGGTTTGAACTTCCTCTCCCCGAAGCCAGTCCCGATGAA
GACGGTGGGCTGTCCTCCGCCCAAGCCGGCGAAGCTTTACAGAGGAGTTA
GACAGCGTCATTGGGGCAAATGGGTCGCTGAGATCCGCTTGCCCAAGAAC
CGGACTCGGCTCTGGCTCGGCACTTTTGACACGGCCGAAGAAGCCGCGTT
GGCCTACGATAAGGCGGCCTACAAGCTACGTGGCGACTTCGCTCGGCTCA
ACTTCCCTAACCTACGTCACAATGGGTCTCACATCGGTGGCGAGTTCGGC
GAGTACAAGCCTCTTCATTCTTCAGTTGATGCGAAATTGGCAGCCATTTG
TGAGAACTTGGCCGAGACGCAAAAACTGGGGACTAGTAAGAAAGAGAAAC
AAAGTAACTCCGCCCAAAAGAAACACCCCGATCCGGGAATAAGAAAATTG
ACGTCCTCGAAAGACCCGGAGTCGAGGATCAGCGGGAACAAAAGAACGGC
AATACAGAGTCCACACTCATGCCGGACCGACGATCCTGGGCTGCCCAACT
CAGAGGCTCCCACCCAA
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