EY684683

Overview
NameEY684683
Unique NameEY684683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLKMQ 178
            TAFGGFKSR+QVPWLVDKYMKKEIKVDEYITHNM L +I +AFH +H G CLRCVL MQ
Sbjct:  322 TAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAMQ 380          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLKMQE 181
            TAFGGFKSRSQVPWLV+KY+KKEIKVDEYITHN+TL EI +AF  +H G CLRCVL + +
Sbjct:  319 TAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVLAVHD 378          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVL 169
            TAFGGFKSR+QVPWLV+KYM KEIKVDEYITHN+TL EI +AF  +H G CLRCVL
Sbjct:  320 TAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVL 169
            TAFGGFKSRSQVPWLV+KY+ KEIKVDEY+TH+M L +I +AF  +H G CLRCVL
Sbjct:  322 TAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVL 169
            TAFGGFKSRSQVPWLV+KY+ KEIKVDEY+TH+M L +I +AF  +H G CLRCVL
Sbjct:  322 TAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLKM 175
            T FGG+K +S +P L+DKYM KEI +DE+ITHN++  EI +AF  M  G CLRCVL M
Sbjct:  322 TLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLKM 175
            TAFGG+KS   VP LV +YM K+IKVDE++T N++  +I +AF  MH GD +R VLKM
Sbjct:  317 TAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLKM 175
            TAFGG+KS   VP LV +YM K+IKVDE++THN++  EI +AF  MH G  +R V+K+
Sbjct:  317 TAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLK 172
            TAFGG+KS   VP LVD+YM K++KVDE++TH +   +I EAF  MH G  +R VLK
Sbjct:  316 TAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          
BLAST of EY684683 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEICEAFHYMHGGDCLRCVLKMQE 181
            TAFGGFKSR  VP LVD YM K++ +DE+++H ++  +I EAF  MH G+ +R VL + E
Sbjct:  319 TAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVLDIPE 378          
The following BLAST results are available for this feature:
BLAST of EY684683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADHX_MAIZE4.535e-2281.36Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA1.905e-2075.00Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH1.613e-1978.57Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSJ3.042e-1873.21Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI3.042e-1873.21Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHL6_ARATH8.573e-1358.62Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_MOUSE2.112e-1156.90Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_HUMAN2.758e-1155.17Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_UROHA3.602e-1156.14Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_OCTVU4.704e-1151.67Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684683 ID=EY684683; Name=EY684683; organism=Citrus sinensis; type=EST; length=682bp
AACAGCTTTTGGTGGTTTCAAGAGCCGTTCACAAGTGCCTTGGCTTGTAG
ACAAGTACATGAAGAAGGAAATTAAGGTTGATGAGTACATAACTCACAAT
ATGACTCTTTGGGAGATCTGCGAGGCATTCCATTATATGCATGGAGGGGA
CTGCCTACGCTGTGTGCTTAAAATGCAGGAATGAGAGGATCTATTGAGCC
CTGCATTAGTTCTTATGAAATGGTATATTTTGGTGTTTACATGGAAATTG
CATCCTTTTATGTGCAAACTGTGAGTGTGTGAAGAAAACTACTCTAATGT
GAGATAGTTTGGCATGTGTTGCACCAAAAATGTTTCTATTCAACTTTATT
AAGTAGCACATTGCTAATGAACTTGCATCACAATAATAAATGTGTTGTCT
ATGAAGTATGAACTATCTGGTGCTGCAGTAAGCTTTCCAAATAACATTTT
TGGGATCCCTGAAAAAAAAAAAAAAAAAAACAAAAAGAGAAACCATTCTA
TAAAATACCAGTTAAGGAGCCGGCGGTGCGAACCACTACACTTCTACAAA
TACAACACCAAACATTCAGCAACCTGAAAGGGCGATTCACAACAGCCCGA
AAAAAAAGAGCGGGCCAAAAAACAACACAACGGAAATGAAACCGCACAAA
CAAATAAACAAAACATCCGAAAAACGACACAA
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