EY684675

Overview
NameEY684675
Unique NameEY684675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684675 vs. ExPASy Swiss-Prot
Match: PSL1_HUMAN (Signal peptide peptidase-like 2B OS=Homo sapiens GN=SPPL2B PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.473e-16
Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   64 VDINTASAVLFVLVASCFLVMLYKLMSNWFLELLVI----LFCIGGVEGLQTCLVALLSRW-FRRAGESFIKVPFFGAVSHLT-LAVTPFCIAFAVVWAIYRKVS-FAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFMYDIFWVFVS 501
            VD+      +FV++    LV+LY     +F +LLV     +FC+    GL +CL   + R  F +       +P+F        L +  FC+A +VVW ++R    +AW+ QD LGIA  + +L+ + +P  K  T+LL   F+YDIF+VF++
Sbjct:  219 VDVTPVMTCVFVVMCCSMLVLLY-----YFYDLLVYVVIGIFCLASATGLYSCLAPCVRRLPFGKCRIPNNSLPYFHKRPQARMLLLALFCVAVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFIT 366          

HSP 2 Score: 21.1718 bits (43), Expect = 5.473e-16
Identity = 6/13 (46.15%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  561 KDGIPMLLKIPRM 599
            ++ +PM+LK+PR+
Sbjct:  390 REKLPMVLKVPRL 402          
BLAST of EY684675 vs. ExPASy Swiss-Prot
Match: PSL2_HUMAN (Signal peptide peptidase-like 2A OS=Homo sapiens GN=SPPL2A PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16
Identity = 47/141 (33.33%), Postives = 79/141 (56.03%), Query Frame = 1
Query:   82 SAVLFVLVASCFLVMLYKLMSNWFLELLVILFCIGGVEGLQTCLVALLSRWFRRAGESFIKVPFFGAVSHLTLAVTPFCIAFAVVWAIYRKVS-FAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFMYDIFWVFVS 501
            + V+FV++    +V+LY     W + +++ +FCI     L  CL AL+ +     G+  I          L + ++  CIA AVVWA++R    +AWI QDILGIA  + +++ + +PN K   +LL    +YD+F+VF++
Sbjct:  222 TVVIFVVICCVMMVLLY-FFYKWLVYVMIAIFCIASAMSLYNCLAALIHKI--PYGQCTIACRGKNMEVRL-IFLSGLCIAVAVVWAVFRNEDRWAWILQDILGIAFCLNLIKTLKLPNFKSCVILLGLLLLYDVFFVFIT 358          
BLAST of EY684675 vs. ExPASy Swiss-Prot
Match: PSL2_MOUSE (Signal peptide peptidase-like 2A OS=Mus musculus GN=Sppl2a PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14
Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = 1
Query:   82 SAVLFVLVASCFLVMLYKLMSNWFLELLVILFCIGGVEGLQTCLVALLSRWFRRAGESFIKVPFFGAVSHLTLAVTPFCIAFAVVWAIYRKVS-FAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFMYDIFWVFVS 501
            + V+FV++    +V+LY     W + +++ +FCI     L  CL AL+ R     G+  I          L + ++  CI+ AVVWA++R    +AWI QDILGIA  + +++ + +PN     +LL    +YD+F+VF++
Sbjct:  226 TVVVFVVICCIMIVLLY-FFYRWLVYVMIAIFCIASSMSLYNCLSALIHRM--PCGQCTILCCGKNIKVSL-IFLSGLCISVAVVWAVFRNEDRWAWILQDILGIAFCLNLIKTMKLPNFMSCVILLGLLLIYDVFFVFIT 362          
BLAST of EY684675 vs. ExPASy Swiss-Prot
Match: PSL1_CHICK (Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 1
Query:   64 VDINTASAVLFVLVASCFLVMLYKLMSNWFLELLVILFCIGGVEGLQTCLVALLSRWFRRAGESFI---KVPFFGA---VSHLTLAVTPFCIAFAVVWAIYRKVS-FAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFMYDIFWVFVS 501
            VD+      +FV++    LV+LY    +  + +++ +FC+    GL +CL   + R+    G+  I    +P+F     V  L LAV  FCI+ +VVW ++R    +AW+ QD LGIA  + +L+ + +P  K  T+LL   F+YD+F+VF++
Sbjct:  215 VDVTPIMICVFVVMCCSMLVLLYFFYDH-LVYVIIGIFCLAASIGLYSCLSPFVRRF--PLGKCRIPDNNLPYFHKRPQVRILLLAV--FCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFIT 362          
BLAST of EY684675 vs. ExPASy Swiss-Prot
Match: PSL1_MOUSE (Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14
Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   64 VDINTASAVLFVLVASCFLVMLYKLMSNWFLELLVILFCIGGVEGLQTCLVALLSRW-FRRAGESFIKVPFFGAVSHLT-LAVTPFCIAFAVVWAIYRKVS-FAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFMYDIFWVFVS 501
            VD+      +FV++    LV+LY       + +++ +FC+    GL +CL   + +  F         +P+F        L +  FC+  +VVW I+R    +AW+ QD LGIA  + +L+ + +P  K  T+LL   F+YDIF+VF++
Sbjct:  212 VDVTPVMICVFVVMCCFMLVLLYYFYDR-LVYVIIGIFCLASSTGLYSCLAPFVRKLPFCTCRVPDNNLPYFHKRPQARMLLLALFCVTVSVVWGIFRNEDQWAWVLQDTLGIAFCLYMLKTIRLPTFKACTLLLLVLFIYDIFFVFIT 359          
BLAST of EY684675 vs. ExPASy Swiss-Prot
Match: PSL1_RAT (Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 46/152 (30.26%), Postives = 79/152 (51.97%), Query Frame = 1
Query:   64 VDINTASAVLFVLVASCFLVMLYKLMSNWFLELLVILFCIGGVEGLQTCLVALLSRW-FRRAGESFIKVPFFGAVSHLT-LAVTPFCIAFAVVWAIYRKVS-FAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFMYDIFWVFVSKKL 510
            VD+      +FV++    LV+LY       + +++ +FC+    GL +CL   + +  F         +P+F        L +  FC+  +VVW ++R    +AW+ QD LGIA  + +L+ + +P  K  T+LL   F+YDIF+VF++  L
Sbjct:  212 VDVTPVMICVFVVMCCFMLVLLYYFYDR-LVYVIIGIFCLASSTGLYSCLAPCVRKLPFCTCRVPDNNLPYFHKRPQARMLLLALFCVTVSVVWGVFRNEDQWAWVLQDTLGIAFCLYMLRTIRLPTFKACTLLLLVLFVYDIFFVFITPYL 362          
The following BLAST results are available for this feature:
BLAST of EY684675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PSL1_HUMAN5.473e-1633.33Signal peptide peptidase-like 2B OS=Homo sapiens G... [more]
PSL2_HUMAN7.835e-1633.33Signal peptide peptidase-like 2A OS=Homo sapiens G... [more]
PSL2_MOUSE1.478e-1432.62Signal peptide peptidase-like 2A OS=Mus musculus G... [more]
PSL1_CHICK3.292e-1433.33Signal peptide peptidase-like 2B OS=Gallus gallus ... [more]
PSL1_MOUSE5.615e-1430.87Signal peptide peptidase-like 2B OS=Mus musculus G... [more]
PSL1_RAT7.333e-1430.26Signal peptide peptidase-like 2B OS=Rattus norvegi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-B01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684675 ID=EY684675; Name=EY684675; organism=Citrus sinensis; type=EST; length=773bp
AGTACGGTCGGGATTCCGGGTCGACCCACGCGTCCGGCCAAAGCAGTAGG
TGTCAGTGGTGTTGTGGACATTAACACAGCATCTGCTGTCCTATTCGTTT
TAGTTGCTTCATGCTTCTTGGTCATGCTTTACAAACTTATGTCAAACTGG
TTCCTTGAGCTATTGGTCATTCTTTTCTGCATAGGTGGTGTAGAGGGCTT
GCAAACTTGCTTGGTTGCTTTATTATCAAGGTGGTTCAGACGTGCTGGAG
AATCATTCATCAAAGTACCTTTCTTTGGAGCTGTCTCTCATCTTACTTTG
GCTGTTACTCCATTCTGCATAGCATTTGCTGTTGTGTGGGCCATTTATCG
CAAGGTCTCCTTTGCATGGATTGGTCAAGATATTCTTGGAATTGCGCTGA
TAATAACAGTCCTGCAAATTGTCCATATTCCTAATCTCAAGGTGGGTACA
GTTCTTCTCAGCTGTGCCTTCATGTACGACATCTTTTGGGTATTTGTTTC
CAAGAAGTTGTTTCATGAAAAGTGTGATGATTGTGGTGGCACGTGGCGAT
AAAAGTGGTGAAGGATGGTATCCCAATGCTATTGAAGATTCCTCGCATGT
TTGACCCATGGGGCGGTTACAGCATCATCGGCTTTTGGGGACAAATCTTT
GTCCTGCGATTGGAAAAAAACATTTCACTCAAGGTTAAACCTCAGTGACT
TTTACTCCCACACATGCCTATTAGAGGATTGAAATGCCACGCCATTACTT
CCAAAAATAGTATTGGAAATGTG
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