EY684660

Overview
NameEY684660
Unique NameEY684660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 88/243 (36.21%), Postives = 125/243 (51.44%), Query Frame = 3
Query:   60 KLKWQLVLFATAILSVLVIVHGDESSVKPLVKIVKGKKLCDKGWECK--GW---SEYCCNQT------------------ISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMT 719
            K+K  L LF   I S+L+ +   E   +       G  LC  G  C   GW   +E  C Q                   +S    + QF+++   RN     A GF+ Y++FITAA  +   GFGT+      +KEVAAF G    +T+ G+  A  GP +WG C+ +E +P   YC+     T+PC  G  Y+GRG + L WNYNYG  G A+ VD+LN+P+ + N+A +AF+AA+W WMT
Sbjct:   13 KMKTNLFLFL--IFSLLLSLSSAEQCGRQA-----GGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT 244          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 77/207 (37.20%), Postives = 109/207 (52.66%), Query Frame = 3
Query:  165 GKKLCDKGWECK--GW----SEYC--------CNQT-------ISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTP 722
            G  LC  G  C   GW      YC        C  T       +S      QF+++   RN     A GF+ Y +FI AA  +   GFGT+      +KE+AAF G    +T+ G+  A  GP +WG C+ +E +P+  YC    ++  PC  G SY+GRG + L WNYNYG+ G A+  D+LN+P+ + N+  +AF+AA+W WMTP
Sbjct:   28 GGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQCGGTPPGPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP 230          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.933e-34
Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTP 722
            F+ +   RN P   A GF+ Y +F+ AA  +    FGT+    + ++E+AAFLG    +T+ G+  A  GP AWG C+ KE +P+  YC    +Y  PC PG SY+GRG L L WNYNYG  GEAL+V++L +P+ +  +  L+F+ A+W WMTP
Sbjct:   11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP 161          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.873e-32
Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYG-VATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTP 722
            F  +   RN     A GF+ Y +FI AA  +    F T+  +   ++E+AAFL     +T+ G G  A  GP AWG CYN+E++P   YC  D    YPC PG  Y GRG + L WNYNYG+ G A+ VD+LN+P+ + ++ T++F++A W WMTP
Sbjct:   61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASD--PNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP 212          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.873e-32
Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYG-VATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTP 722
            F  +   RN     A GF+ Y +FI AA  +    F T+  +   ++E+AAFL     +T+ G G  A  GP AWG CYN+E++P   YC  D    YPC PG  Y GRG + L WNYNYG+ G A+ VD+LN+P+ + ++ T++F++A W WMTP
Sbjct:   83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASD--PNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP 234          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 75/228 (32.89%), Postives = 119/228 (52.19%), Query Frame = 3
Query:   69 WQLVLFATAILSVLVIVHGDESSVKPLVKIVKGKKLCDK-GWECKGWSEYC-------CNQT--ISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTP 722
            W LV F   +LS++++   ++   +   ++  G   C K GW C   ++YC       C+ T  I        F ++   RN       GF+ Y +FI AA  +   GFGT+      ++E+AAFL     +T+ G+  A  GP AWG CY +E      YC    ++  PC  G  Y+GRG + + +NYNYG+ G+A+ VD++N+P+ +  +A ++F+ A W WMTP
Sbjct:    4 WALVAFC--LLSLILVGSAEQCGGQAGGRVCPGGACCSKFGW-CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFP--GFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQW--PCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTP 224          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.195e-32
Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  231 ISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKSIQRRRTNPS 758
            +S       + +LF  ++     A GF+ Y SF+ AA  +    F  +      ++EVAAFL  +  +T+ G+  A  GP AWGLCY +E++P   YCD   K  +PC PG SYHGRG + + WN+NYG  G+AL  D L +PE + N + +AFQ A+W WMTP      R T PS
Sbjct:   49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQ-WPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTP------RDTKPS 215          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.533e-31
Identity = 73/237 (30.80%), Postives = 125/237 (52.74%), Query Frame = 3
Query:   60 KLKWQLVLFATAILSVLVIV---HGDESSVKPLVKIVKGKKLCDK-GWECKGWSEYC---CNQT----------ISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMT 719
            K +  +++++  ++ +L++V   +G++   +    +  G   C + GW C   ++YC   C             +S       F+ +   RN     A GF+ Y +FI AA  Y    FG +      ++E+AAFLG    +T+ G+  A  GP AWG C+ +E +P+  YC    ++  PC PG  Y+GRG + + WNYNYG+ G A+ VD+LN P+ +  ++ ++F++A+W WMT
Sbjct:    3 KNRMMMMIWSVGVVWMLLLVGGSYGEQCGRQAGGALCPGGNCCSQFGW-CGSTTDYCGPGCQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPST-YCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT 233          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.296e-31
Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = 3
Query:  222 NQTISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMT 719
            +Q IS       FE +   RN     A GF+ Y +FITA   +    FGT+       KE+AAFL     +T+ G+  A  GP +WG CYN+E      YC    ++  PC PG  Y GRG + + +NYNYG  G A+ V++LN+P+ + N+A ++F+ A+W WMT
Sbjct:    2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT 163          

HSP 2 Score: 21.1718 bits (43), Expect = 7.296e-31
Identity = 7/26 (26.92%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  719 SSEKHPASAHEPFVGNWKPTKMTLGP 796
            ++++   SAH+   G W P+     P
Sbjct:  163 TAQQPKPSAHDVITGRWSPSVADSAP 188          
BLAST of EY684660 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.290e-30
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTP 722
            FE L   RN     A GF+ Y +F+ AAA +    FG +      ++EVAAFLG    +T+ G+  A  GP +WG C+ +E +P   YC    ++  PC PG  Y+GRG + L +N+NYG  G A+ VD+L++P+ +  +AT++F+ A+W WMTP
Sbjct:   98 FERLLLHRNDGACPARGFYTYEAFLAAAAAFP--AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP 248          
The following BLAST results are available for this feature:
BLAST of EY684660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHIB_ARATH4.033e-3536.21Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_BRANA2.614e-3437.20Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA9.933e-3443.23Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_GOSHI1.873e-3242.31Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI1.873e-3242.31Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIB_VITVI3.195e-3232.89Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI10_ORYSJ3.195e-3240.34Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_PHAVU3.533e-3130.80Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHID_SOLLC7.296e-3138.55Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI2_ORYSJ2.290e-3040.00Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684660 ID=EY684660; Name=EY684660; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGAATTTCTAAACGTAGCTCATTTAATTTCCTCCCATTCAT
TTAGCTATGAAGCTCAAATGGCAGCTAGTACTTTTTGCAACGGCAATTTT
ATCAGTGCTAGTCATTGTGCATGGCGATGAATCTTCAGTGAAGCCATTAG
TGAAGATTGTGAAGGGCAAGAAATTGTGTGACAAAGGGTGGGAGTGTAAA
GGATGGTCTGAGTATTGCTGCAATCAAACGATATCGGATTACTTTCAGAC
TTACCAATTTGAGAACCTTTTTGCAAAGCGTAACACCCCTGTGGCTCATG
CTGTTGGGTTTTGGGACTACCATTCTTTTATAACCGCTGCTGCTTTATAT
CAGCCTCATGGGTTTGGTACCAGTGCAGGAAAGCTCATGGGTCAAAAGGA
AGTTGCTGCTTTTCTTGGCCACGTTGGAAGCAAAACCTCGTGTGGGTATG
GAGTGGCAACTGGTGGACCATTGGCTTGGGGTCTATGCTACAACAAGGAG
ATGAGTCCTAACCAGATATACTGCGATGATGACTTCAAATACACATATCC
TTGCACTCCTGGAGTTTCATATCATGGCCGCGGTGCCTTGCCCCTCTACT
GGAACTACAACTATGGGGAAACAGGAGAAGCCCTAAAAGTTGATATATTG
AACCACCCAGAGTACATAGAAAACAATGCGACCCTAGCCTTTCAGGCAGC
AATGTGGAGGTGGATGACTCCAGTGAAAAGCATCCAGCGTCGGCGCACGA
ACCCTTCGTTGGGAACTGGAAACCTACCAAGATGACACTTGGGCCAAAGG
GTGCATGGATTCGGCACCACCATGAAGGTCTGGATGGTGACCAAGTTTGG
GGCAAGGGTG
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