EY684656

Overview
NameEY684656
Unique NameEY684656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8810 contig Csv1_Contig8810:1..852. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS9_ARATH (Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.928e-79
Identity = 149/248 (60.08%), Postives = 175/248 (70.56%), Query Frame = 1
Query:   13 KALASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQGSGGTDSSTFINGGSQDSRAAEGPQAPYINLWG*KGEEIPEMTAELE 756
            KA+ SW EKE KADY+ TN TP +KTPSPMEKQAA+LYTR  F+KFQEE VETLA  A  I D+G  TTY VAKFGE HK  TVSF+S+E+KA+CSCQMFEYSGIICRH+LAVF AKNVL LPS+Y+L+RWT+ AK      E   +  N  +ESL + +N+LRQEA KYVEEGAKSI +Y VAMDAL EAAKKV AA N+    T  +   NG +  S  A        +  G K   I E+TAELE
Sbjct:  250 KAIDSWREKELKADYEATNSTPVMKTPSPMEKQAASLYTRAAFIKFQEEFVETLAIPANIISDSGTHTTYRVAKFGEVHKGHTVSFDSLEVKANCSCQMFEYSGIICRHILAVFSAKNVLALPSRYLLRRWTKEAKI--RGTEEQPEFSNGCQESLNLCFNSLRQEATKYVEEGAKSIQIYKVAMDALDEAAKKVAAASNR----TPGTRLPNGEAYPSEEARETANATNHPGGEKERTILELTAELE 491          

HSP 2 Score: 42.3578 bits (98), Expect = 1.928e-79
Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 3
Query:  765 QRCEVYRANLLAGLKDWEKQRLKLSVKV 848
            QRCEVYRANLL+ L+D E+Q+ +LS+KV
Sbjct:  495 QRCEVYRANLLSILRDMEEQKFQLSLKV 522          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.106e-61
Identity = 122/201 (60.70%), Postives = 148/201 (73.63%), Query Frame = 1
Query:   13 KALASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQ 615
            KAL S  EKE KADYDT N  P LKTPSPMEKQA+ LYTR++FM+FQEELV TL   A+K DD G + TY VAK+GE HKA  V FN +EM+A+CSCQMFE+SGIICRH+LAVFR  N+LTLP  YILKRWTRNAK+    D+       +  ES TVRYN LR +A  +V+E  KS++  +VA+ AL+EAAK V+ A N+
Sbjct:  499 KALESRLEKEVKADYDTMNSPPVLKTPSPMEKQASELYTRKLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQMFEFSGIICRHILAVFRVTNLLTLPPYYILKRWTRNAKSSVIFDDYNLHAYANYLESHTVRYNTLRHKASNFVQEAGKSLYTCDVAVVALQEAAKTVSLAMNK 699          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.653e-57
Identity = 111/201 (55.22%), Postives = 143/201 (71.14%), Query Frame = 1
Query:   13 KALASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQ 615
            +A+ SW E E +AD DT N  P LKTPSPME QAANL+TR++F KFQEELVET A++A +I+D G  +T+ VA F  D+KA  V+F   EM+A+CSCQMFE+SGI+CRHVL VF   N+LTLP  YIL+RWTRNAK+    DE  S+   +  +S   RYN+L +EAIKY EEGA +   YN+A+  LRE  KKV+  + +
Sbjct:  444 RAMESWFEMEIEADLDTVNTPPVLKTPSPMENQAANLFTRKIFGKFQEELVETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSGILCRHVLTVFTVTNILTLPPHYILRRWTRNAKSMVELDEHVSE---NGHDSSIHRYNHLCREAIKYAEEGAITAEAYNIALGQLREGGKKVSVVRKR 641          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.680e-36
Identity = 77/198 (38.89%), Postives = 121/198 (61.11%), Query Frame = 1
Query:    4 RVRKALASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKV 597
            R  + L    E+E K D+++ N  PFL+T  P+E+Q   LYT  +F  FQ EL ++      K  + GA++ + V K G +++   V+F++  + ASCSCQMFEY G++CRH+L VF   ++  LPS+YIL RWT+NA+ G   D + S + + D ++L +   +LR+ A KY+E G  S+  Y +A + +RE  KK+
Sbjct:  566 RYEQGLEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVRKCGNENEKHAVTFSASNLNASCSCQMFEYEGLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRD-VESGVTSQDLKALMIW--SLREAASKYIEFGTSSLEKYKLAYEIMREGGKKL 760          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.982e-36
Identity = 79/198 (39.90%), Postives = 121/198 (61.11%), Query Frame = 1
Query:    4 RVRKALASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKV 597
            R  +AL    E+E K D+++ N  PFL+T  P+E+Q   LYT  VF  FQ ELV++      K  + GA++ + V K G + +   V+F++  + +SCSCQMFE+ G++CRH+L VF   ++  LPS+YIL RWT+NA+ G   D + S +   D ++L V   +LR+ A KY+E G  S+  Y +A + +RE  KK+
Sbjct:  590 RYEQALEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTVFRIFQNELVQSYNYLCLKTYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRD-MESGVSAQDLKALMVW--SLREAASKYIEFGTSSLEKYKLAYEIMREGGKKL 784          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 76/216 (35.19%), Postives = 118/216 (54.63%), Query Frame = 1
Query:   19 LASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQGSGGTDSSTFINGGSQD 666
            L + +E+E  AD+DT +  P LK+PSP EKQ A  YT  +F KFQ E++  +A    K  +   + T+ V    +D     V+++  + +  C C+MFEY G +CRH L + +     ++P QYILKRWT++AK+G  A E A  +     ++   RYN+L   A +  EEG  S   YN+A+  L E  K      N  +  T+S++ +N G+ +
Sbjct:  477 LQNRYEEESVADFDTCHKQPALKSPSPWEKQMATTYTHTIFKKFQVEVLGVVACHPRKEKEDENMATFRVQDCEKDDDF-LVTWSKTKSELCCFCRMFEYKGFLCRHALMILQMCGFASIPPQYILKRWTKDAKSGVLAGEGADQI-----QTRVQRYNDLCSRATELSEEGCVSEENYNIALRTLVETLKNCVDMNNARNNITESNSQLNNGTHE 686          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 71/203 (34.98%), Postives = 112/203 (55.17%), Query Frame = 1
Query:   34 EKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQGSGGTDSST 642
            E+E KAD +  N  P +K+PSP EK  + +YT  VF KFQ E++  +A S  + +     +T+ V  F E+++   V++N  + + SC C++FEY G +CRH L V +  ++ ++PSQYILKRWT++AK+   + E          ++  +RYN+L + A+K  EE + S   YN+A  A+  A          G    D  T
Sbjct:  491 EEEAKADSEMWNKQPAMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIACSPREENRDATCSTFRVQDF-ENNQDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDAKSRHFSGE------PQQLQTRLLRYNDLCERALKLNEEASLSQESYNIAFLAIEGAIGNCAGINTSGRSLPDVVT 686          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.846e-27
Identity = 67/197 (34.01%), Postives = 112/197 (56.85%), Query Frame = 1
Query:   10 RKALASWHEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVT--TYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKK 594
            +K +   +E+E K++ +T    P LK+PSP  KQ A +YTR +F KFQ E++  +A    K  +   V   T+ V  + E +++  V +NS   +  CSC++FE  G +CRH + V +    L++PSQY+LKRWT++AK+    +   +D+ ++  +    RY +L   ++K  EE + S   YN  ++ L EA +K
Sbjct:  357 KKMIQERYEEEEKSEIETLYKQPGLKSPSPFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDGVNKRTFRVQDY-EQNRSFVVVWNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKSREVMESDQTDVESTKAQ----RYKDLCLRSLKLSEEASLSEESYNAVVNVLNEALRK 548          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.509e-26
Identity = 70/194 (36.08%), Postives = 106/194 (54.64%), Query Frame = 1
Query:   31 HEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKN 612
            +E+E KAD+D  +  P LK+PSP EKQ   +Y+  +F +FQ E++   A   TK  + G  TTY V  F ++ K   V ++  +    CSC+ FEY G +CRH + V +   V T+P  Y+L+RWT  A+           + ++ R     R+N+L + AI   EEG+ S   Y+VAM A++EA K+     N
Sbjct:  418 YEEEAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAAACHLTKESEEG--TTYSVKDFDDEQKY-LVDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSGVFTIPINYVLQRWTNAARNRHQISRNLELVQSNIR-----RFNDLCRRAIILGEEGSLSQESYDVAMFAMKEAFKQCAVTIN 603          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 55/207 (26.57%), Postives = 97/207 (46.86%), Query Frame = 1
Query:   40 EFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQGSGGTDSSTFINGGS 660
            E K D +  +  P L++    EKQ + +YT   F KFQ E+   ++    K  + G    + +  F E+ +   V+ N+  + A CSC +FEY G +C+H + V ++ +V  +PSQYILKRW++        ++  + + N        R+++L +  +K     + S      A+  L E  K   +  N     ++    + GGS
Sbjct:  428 EAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFKKFQAEVPGVVSCQLQKEREDGTTAIFRIEDF-EERQNFFVALNNELLDACCSCHLFEYQGFLCKHAILVLQSADVSRVPSQYILKRWSKKGNNKEDKNDKCATIDNR-----MARFDDLCRRFVKLGVVASLSDEACKTALKLLEETVKHCVSMDNSSKFPSEPDKLMTGGS 628          
The following BLAST results are available for this feature:
BLAST of EY684656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FRS9_ARATH1.928e-7960.08Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis tha... [more]
FRS5_ARATH1.106e-6160.70Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
FRS3_ARATH1.653e-5755.22Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis tha... [more]
FRS7_ARATH4.680e-3638.89Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis tha... [more]
FRS12_ARATH7.982e-3639.90Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis th... [more]
FAR1_ARATH1.319e-3035.19Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
FHY3_ARATH1.365e-2734.98Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidops... [more]
FRS1_ARATH8.846e-2734.01Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis tha... [more]
FRS4_ARATH1.509e-2636.08Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis tha... [more]
FRS2_ARATH2.580e-1826.57Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis tha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-G08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684656 ID=EY684656; Name=EY684656; organism=Citrus sinensis; type=EST; length=849bp
CCACGCGTCCGGAAAGCTTTAGCAAGTTGGCATGAGAAGGAATTTAAAGC
AGATTATGACACCACTAACTGTACACCATTTCTGAAGACACCATCTCCTA
TGGAAAAACAAGCAGCGAACCTCTATACAAGAAGAGTATTCATGAAATTT
CAAGAGGAATTGGTTGAAACGCTTGCTAATTCTGCAACTAAAATTGATGA
TGCAGGAGCGGTCACCACATATCATGTGGCCAAATTTGGGGAAGACCACA
AAGCACGAACTGTCAGTTTTAATTCTATTGAGATGAAAGCTAGCTGCAGC
TGCCAGATGTTTGAATATTCGGGAATAATTTGTCGGCATGTATTAGCTGT
TTTTAGAGCAAAAAATGTTCTCACACTTCCTTCTCAATATATATTAAAAC
GATGGACAAGAAACGCCAAGACTGGACCTGCAGCAGATGAGCTTGCATCT
GACATGCCAAACAGTGACCGAGAATCTTTAACAGTTCGATATAACAACCT
ACGCCAGGAAGCAATCAAATATGTAGAAGAAGGGGCAAAATCGATTCATG
TCTATAATGTGGCAATGGATGCTTTAAGAGAAGCTGCTAAGAAGGTTACT
GCTGCCAAGAATCAAGGTTCTGGAGGCACTGACAGCAGCACTTTTATCAA
TGGAGGTAGCCAGGACTCACGTGCAGCTGAGGGACCTCAAGCCCCATACA
TCAATCTGTGGGGATGAAAAGGAGAAGAAATTCCTGAAATGACTGCTGAG
TTGGAGAATATAATCAACGATGTGAAGTGTACAGAGCAAATCTGCTGGCT
GGTCTGAAAGATTGGGAAAAACAGAGGTTGAAGCTCTCAGTGAAGGTGC
back to top