EY684637

Overview
NameEY684637
Unique NameEY684637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 99/120 (82.50%), Postives = 106/120 (88.33%), Query Frame = 1
Query:  109 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            M +KTKGRKEEVVTRE+TINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIRSVP+          NDDEDAKEELYSLVTVAEIP +GL+GLGTK+IEDED
Sbjct:    1 MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.087e-48
Identity = 96/120 (80.00%), Postives = 105/120 (87.50%), Query Frame = 1
Query:  109 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            MVEKTKGRKEEVVTRE+TINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIRSVP+          NDDEDAKEELYSLVTVA+IP   L+GLG ++IE++D
Sbjct:    1 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.328e-46
Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 1
Query:  112 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            + + KGRKEEV+TRE+TINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWS+GIR  P+          NDDEDAKEE +SLVTVAEIP EGL GLGTKVIE+ED
Sbjct:    1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_PICMA (60S ribosomal protein L31 OS=Picea mariana GN=RPL31 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.735e-46
Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = 1
Query:  109 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            MVEK K R+ EV TRE+TINLH+RLHGCTFKK APKA+KEIRKFA+KAMGT DVR+DVKLNK +WSRGIRSVP+          ND+EDAK+ELYS+VTVAE+PPEGL GLGTK+IE+ED
Sbjct:    1 MVEKGKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL312_ARATH (60S ribosomal protein L31-2 OS=Arabidopsis thaliana GN=RPL31B PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.959e-46
Identity = 91/119 (76.47%), Postives = 100/119 (84.03%), Query Frame = 1
Query:  112 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            + + KGRKEEVVTRE+TINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNKQIWS+GIR  P+          NDDEDAKEE +SLVTVAEIP EGL GLGTK+IE+ED
Sbjct:    1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.593e-46
Identity = 92/119 (77.31%), Postives = 100/119 (84.03%), Query Frame = 1
Query:  112 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            +EK KGRKEEVVTRE+TINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNKQIWS+GIR  P+          NDDEDAKEE +SLVTVAEIP EGL GLGTKVIE+E+
Sbjct:    1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.125e-45
Identity = 91/116 (78.45%), Postives = 101/116 (87.07%), Query Frame = 1
Query:  121 TKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            +K RKEEVV+RE+TINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVP+          NDDEDAKEELYSLVTVAEIP  GL+GLGT+VI++E+
Sbjct:    6 SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_CHLRE (60S ribosomal protein L31 OS=Chlamydomonas reinhardtii GN=RPL31 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.059e-31
Identity = 69/115 (60.00%), Postives = 84/115 (73.04%), Query Frame = 1
Query:  118 KTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            K K R +E VTRE+TI+L KRLH  +FKK APKA+KEIRKFA K MGT DVR+DVKLNK +WS+GI++VP           NDDEDAKEE+YS VTVAE   +  +G GT V++D
Sbjct:    3 KDKSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD 115          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_CYAPA (60S ribosomal protein L31 OS=Cyanophora paradoxa GN=RPL31 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.022e-30
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 1
Query:  115 EKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDE 465
            E  K R  E+VTRE+TINLHKRLHG  FKK+AP+A+KEI+KFA K MGT DVRVD +LNK +W++GIRSVP           NDDEDAKE+LY+LVT   +P    +GL T+ ++ E
Sbjct:    5 ENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQNVDAE 119          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_SPOFR (60S ribosomal protein L31 OS=Spodoptera frugiperda GN=RpL31 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.564e-29
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1
Query:  100 REKMVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIE 459
            + K   K K    EVVTRE+T+NLHKRLHG  FKK+AP+AIKEIRKFAEK MGT DVRVD +LNK +WS+G+R+VP           NDDED+  +L++LVT   +P   ++GL T+ ++
Sbjct:    3 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120          
The following BLAST results are available for this feature:
BLAST of EY684637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_NICGU1.516e-5082.5060S ribosomal protein L31 OS=Nicotiana glutinosa G... [more]
RL31_PANGI1.087e-4880.0060S ribosomal protein L31 OS=Panax ginseng GN=RPL3... [more]
RL313_ARATH1.328e-4677.3160S ribosomal protein L31-3 OS=Arabidopsis thalian... [more]
RL31_PICMA1.735e-4673.3360S ribosomal protein L31 OS=Picea mariana GN=RPL3... [more]
RL312_ARATH2.959e-4676.4760S ribosomal protein L31-2 OS=Arabidopsis thalian... [more]
RL311_ARATH6.593e-4677.3160S ribosomal protein L31-1 OS=Arabidopsis thalian... [more]
RL31_PERFR1.125e-4578.4560S ribosomal protein L31 OS=Perilla frutescens GN... [more]
RL31_CHLRE2.059e-3160.0060S ribosomal protein L31 OS=Chlamydomonas reinhar... [more]
RL31_CYAPA1.022e-3057.2660S ribosomal protein L31 OS=Cyanophora paradoxa G... [more]
RL31_SPOFR9.564e-2953.3360S ribosomal protein L31 OS=Spodoptera frugiperda... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684637 ID=EY684637; Name=EY684637; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGCTTTTGAGATCATTTAATTGAACCCCCGTCTCCTCTTTC
ATTCCCCCTCTCGAGTTTCTGCATTCTTTGAAACCCCTAAAGGTGAAAGA
GAGAGAAAATGGTGGAGAAGACCAAGGGACGAAAGGAGGAGGTGGTGACC
AGAGAGTTCACCATCAACCTTCACAAGCGTCTACATGGCTGTACATTCAA
GAAGAAAGCTCCAAAAGCCATTAAGGAGATCAGGAAATTTGCAGAGAAAG
CTATGGGCACTAAGGATGTTAGGGTTGATGTCAAATTGAACAAGCAAATC
TGGAGCAGGGGCATCCGAAGTGTTCCAAAGAGGGTTAGGGTTCGCATTGC
TCGCAGGAGGAACGATGATGAAGACGCTAAGGAAGAGCTGTACTCTCTTG
TAACTGTTGCAGAAATCCCACCAGAAGGACTGAGGGGGCTTGGCACCAAG
GTCATTGAAGATGAGGATTAAATTTAACACTCTGTTCAAAGAAAACCGTT
GGATAGGAAGGATAGGTTTACATGATAGTTTTGGCATGCTATTCAAGTGT
TATGAGAAAGACTAGTGTTTTTTTCCATCTGTTTGAACTTTAATGTGTTG
TTTTGGATGGAGTTGCTTTTTAGATTGTTACCAATGGCTTGTTANAAAAG
TCCAAAGTTACTTTCCAATTGAATTTCCCTTTTAGATAAATGCTATATTT
ATGGGTTCTGAAAAAAGGTAAAGGTCTCCAATTGAATTCCAGGAGAAAGG
AGAGAGCCGAGGCGGGCGGCAGGGGGGCGCGACGAGGGAGAGAGCGGGGG
AAGGGAGGGGGGGGCCGCCTTGGAGGGGACCCCTCTTAGACCGCGGGGGT
GGCAA
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