EY684628

Overview
NameEY684628
Unique NameEY684628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684628 vs. ExPASy Swiss-Prot
Match: Y5258_ARATH (Uncharacterized protein At5g22580 OS=Arabidopsis thaliana GN=At5g22580 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.476e-33
Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 2
Query:   62 FKHLVIVKFKEGVVVEDIVKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQGFTHAFLMTFNKKEDYTTFASHPIHVEFSATFSAAIEKIVLLDFPTVLGKA 361
            FKHLV+VKFKE   V++I+KG++ LVS+ID VKSFEWG+D E  +MLRQGFTHAF MTF  K+ Y  F SHP+HVEFSA F+A I+KIVLLDFP    K+
Sbjct:    6 FKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKS 105          
BLAST of EY684628 vs. ExPASy Swiss-Prot
Match: POP3_ARATH (Probable protein Pop3 OS=Arabidopsis thaliana GN=At3g17210 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 2
Query:   65 KHLVIVKFKEGVV---VEDIVKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQGFTHAFLMTFNKKEDYTTFASHPIHVEFSATFSAAIEKIVLLDF 340
            KH+++  FK+GV    +E+++KG   LV+ I+ +K+F WG+DV   E L QG+TH F  TF  KE    + +HP HVEF+  F  +++K++++D+
Sbjct:    9 KHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVS-IENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDY 102          
The following BLAST results are available for this feature:
BLAST of EY684628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y5258_ARATH6.476e-3365.00Uncharacterized protein At5g22580 OS=Arabidopsis t... [more]
POP3_ARATH9.395e-1640.00Probable protein Pop3 OS=Arabidopsis thaliana GN=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684628 ID=EY684628; Name=EY684628; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGAAGAATCAAGAGCATATATGGGTGAGGGTGAAGAGGCAG
CAATGGGAGAGTTCAAGCACTTGGTGATTGTTAAGTTCAAGGAAGGTGTG
GTTGTGGAGGATATTGTCAAAGGGATGAAAAAGCTAGTTTCAGAGATTGA
TGCTGTCAAATCTTTTGAATGGGGCCAAGATGTAGAAGGGCAGGAGATGC
TTAGGCAAGGCTTCACACATGCATTCTTGATGACATTCAACAAGAAGGAA
GACTATACAACCTTTGCAAGCCATCCCATCCACGTCGAATTCTCGGCTAC
ATTTTCAGCTGCTATTGAGAAGATTGTCCTGCTTGATTTCCCTACCGTGC
TTGGCAAAGCACCAGCAGCATGACACTCCAAAATTCTAGGCGATAATAAT
TAAGTGAGATTAGTATTAATCTGCTATATGCGTGTGTATGTTTGGTTTGC
TTATCTCTATGAGTTAATATTATTATTTGCCAGTATCAGTAACTATTTGG
TTTGTCACAATATATACCCTTATTATAAGTTCTTTACTTCTGCAATTTCA
ACCAGCTGTATTATGGACACCTATGTTGCATGGATGGAGCTTGATTCCGG
AATTCGGAAATGCAAGAGCCTACAAATCCATTTTTCCTCCCCTCAAAAAC
CACCCCAACGGATCACGCTCCCCAGGATCCAAGCCTTACCGCAACCTGCC
TGCACCCGCATAAACTCTCCTCAGGCCGCCCCCACGCAGCCGCTCGCCCG
CGCCACCGCGTCCGACGCGCCGCGGCTGGCGACGCCCCGCGAACGAGCCT
CTGAACGCCCCCCGCCGCGAATCCAGCGCACCCACCGCGGCGCCGGGAAA
TGCACTCACGCAC
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