EY684589

Overview
NameEY684589
Unique NameEY684589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684589 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.812e-45
Identity = 81/104 (77.88%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:   14 RNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDRWILKDNPTLRELIQWLKDKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLAREVAKVELPPYRRHLD 325
            RNTFANLA+PLFS+AEPVPPK IKH+++SWTVWDRW +  N TLREL++WLK+KGLNAYSISCG+ LL+NSMFPRHKER+D+KVVD+AREVAK+E+P YRRHLD
Sbjct:  925 RNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLD 1028
[Close]
BLAST of EY684589 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.812e-45
Identity = 81/104 (77.88%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:   14 RNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDRWILKDNPTLRELIQWLKDKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLAREVAKVELPPYRRHLD 325
            RNTFANLA+PLFS+AEPVPPK IKH+++SWTVWDRW +  N TLREL++WLK+KGLNAYSISCG+ LL+NSMFPRHKER+D+KVVD+AREVAK+E+P YRRHLD
Sbjct:  925 RNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLD 1028
[Close]
BLAST of EY684589 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 2 
Query:   14 RNTFANLALPLFSMAEPVPPKVIKHRDMSWTVWDRWILKDNPTLRELIQWLKDKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLAREVAKVELPPYRRHLD 325
            RNTFANLALPLFSMAEPVPPKV+KH++ SWTVWDRW ++ N TL EL+QW  DKGL AYSISCG+ LL+N+MF RHK+R+ KKVVD+AREVAKV++P YRRHLD
Sbjct:  927 RNTFANLALPLFSMAEPVPPKVMKHKETSWTVWDRWSVQGNLTLAELLQWFADKGLTAYSISCGTSLLYNNMFARHKDRLTKKVVDIAREVAKVDVPEYRRHLD 1030
The following BLAST results are available for this feature:
BLAST of EY684589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
UBE12_WHEAT1.812e-4577.88Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE11_WHEAT1.812e-4577.88Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE13_WHEAT1.876e-4275.00Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-A01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684589 ID=EY684589; Name=EY684589; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGACCGAAATACATTTGCCAACCTAGCTTTGCCTCTGTTCT
CTATGGCTGAGCCAGTCCCACCAAAGGTCATAAAGCACCGTGATATGAGC
TGGACTGTTTGGGACAGATGGATACTTAAAGACAATCCGACCCTAAGGGA
GCTTATCCAATGGCTCAAGGATAAGGGTTTGAATGCTTATAGCATTTCAT
GTGGAAGCTGCCTGCTCTTTAATAGTATGTTCCCTCGCCACAAAGAGCGG
ATGGACAAGAAGGTTGTCGATCTGGCTAGGGAAGTGGCCAAAGTTGAATT
GCCTCCCTATCGTCGGCACCTGGATGCTGAANCCCAAAAACAACACACGA
GCCCATAATAACATACCCGGGGCGGGGGGGGGGGGGGGGAGGGGGGGGTC
GGCGTGACGCGCGCCAGGGGAGCCGCGGGGAGACGAAGGCAAGACACAAA
GAAAAAGACGGAAAGGAAGCAAAAGAAGAGAGAACAAAATAAAGCCCCGC
CTCGCGAACACGACACGGCGAGGGCGAGGAGCAGACGCAGGGAAACAAGC
ACGGGACGAAACCCACCACCAAAGCACAAAGAACCAGCACGAAAAACAGC
GGGAGGAGGGGGAGGGGGGAAATCAGCGAACAGACACAGGTCGCAGACGC
AAAACGACCCGACACCCCCACACCGGCCACGGCCAGGGGAGGGGCCGGGG
GAAGAGGGGAGGGGGGAGAGAAGAGGAGGGGGGGGAAGGGGGGGGGGAGG
GCAAGGGGGGGAGAGGGCACACCCAGAACCCGTACGGGACAGCAAGAAAG
GCGAAATAGAGGGCCAGGCGCAC
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