EY684585

Overview
NameEY684585
Unique NameEY684585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_ARATH (Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.988e-99
Identity = 184/251 (73.31%), Postives = 206/251 (82.07%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSDKAAVVLYSVGVHTVAELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVENEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTDYNNFELLMH 765
            VVLV+RDAICASIKDMFEEKR+ILEP                     NVVAITSGANMNFDKLR+VTELANVGRQQEAV AT+MPE+ GSFKQFCEL+GPMNI+EFKYR SS+K AVVLYSVGVHT  EL+A+Q+RMESSQLKT NLT SDLVKDHLRYLMGGR +V +EVLCRF FPER G+LM FLD+FSPRWNI+LFHYRGQGETGAN+LVGIQ P+ E+ EF  RA  LGYDY  V+D + F+LLMH
Sbjct:  342 VVLVTRDAICASIKDMFEEKRNILEPAGALALAGAEAYCKYYGLKDVNVVAITSGANMNFDKLRIVTELANVGRQQEAVLATLMPEKPGSFKQFCELVGPMNISEFKYRCSSEKEAVVLYSVGVHTAGELKALQKRMESSQLKTVNLTTSDLVKDHLRYLMGGRSTVGDEVLCRFTFPERPGALMNFLDSFSPRWNITLFHYRGQGETGANVLVGIQVPEQEMEEFKNRAKALGYDYFLVSDDDYFKLLMH 592          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_SOLTU (Threonine dehydratase biosynthetic (Fragment) OS=Solanum tuberosum GN=TD PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.441e-57
Identity = 114/238 (47.90%), Postives = 159/238 (66.81%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSD-KAAVVLYSVGVHTVAELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVENEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDY 723
            +VLV  D I A+IKD+++E R+ILE                     +N+VAI SGANM+F KL  VTELA +G   EA+ AT M EQ GSFK F +L+G MNITE  YRF+S+ K A+VLY V V   ++LE M +++ SS +KT+N + ++LV +H+++L+GG  S+ +E+   FIFPE+ G+L  FL+AFSPRWNI+L  YR QG+   N+LVG Q P++E+ EF  +A+ LGY Y
Sbjct:  107 MVLVRNDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYNIKNENIVAIASGANMDFSKLHKVTELAELGSDNEALLATFMIEQPGSFKTFAKLVGSMNITEVTYRFTSERKEALVLYRVDVDEKSDLEEMIKKLNSSNMKTFNFSHNELVAEHIKHLVGGSASISDEIFGEFIFPEKAGTLSTFLEAFSPRWNITLCRYRDQGDINGNVLVGFQVPQSEMDEFKSQADGLGYPY 344          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_SOLLC (Threonine dehydratase biosynthetic, chloroplastic OS=Solanum lycopersicum GN=TD PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.925e-55
Identity = 114/245 (46.53%), Postives = 161/245 (65.71%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSD-KAAVVLYSVGVHTVAELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVENEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTDYN 744
            +VLV+ D I A+IKD+++E R+ILE                     +N+VAI SGANM+F KL  VTELA +G  +EA+ AT M EQ GSFK F  L+G +N TE  YRF+S+ K A++LY V V   ++LE M E M+SS + T NL+ ++LV DHL++L+GG  ++ +E+   FI PE+  +L  FLDAFSPRWNI+L  YR QG+  A++L+G Q P+ E+ EF  +A++LGY Y  + +YN
Sbjct:  343 MVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYKIKNENIVAIASGANMDFSKLHKVTELAGLGSGKEALLATFMVEQQGSFKTFVGLVGSLNFTELTYRFTSERKNALILYRVNVDKESDLEKMIEDMKSSNMTTLNLSHNELVVDHLKHLVGGSANISDEIFGEFIVPEKAETLKTFLDAFSPRWNITLCRYRNQGDINASLLMGFQVPQAEMDEFKNQADKLGYPYE-LDNYN 586          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_BURM1 (Threonine dehydratase biosynthetic OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ilvA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.323e-54
Identity = 110/238 (46.22%), Postives = 149/238 (62.61%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSDKAAVVLYSVGVHTVAELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVE-NEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDY 723
            VV V  DA+CA+IKD+F++ RS+LEP                    + +VA+TSGANMNFD++R V E A VG  +EAVFA  +PE+ GSFK+FC L+G  N+TEF YR +  ++A +   V +    E   +    ES   KT +LT  +L K+H+RY++GGR  +  +E L RF FPER G+LMKFL + +P WNISLFHYR QG   ++ILVG+Q P+ + AEF      LGY Y
Sbjct:  256 VVTVDTDALCAAIKDVFQDTRSVLEPSGALAVAGAKLYAEREGIENQTLVAVTSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGDRNVTEFNYRIADAQSAHIFVGVQIRRRGESADIAANFESHGFKTADLTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQADHAEFERFLAALGYPY 493          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_HAEIN (Threonine dehydratase biosynthetic OS=Haemophilus influenzae GN=ilvA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.012e-47
Identity = 103/252 (40.87%), Postives = 140/252 (55.56%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSDKAAVVLYSVGVHTVAELEAMQ--ERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVENEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTDYNNFELLM 762
            +VLV  D +CA++KD+FE  R++ EP                   GKN+ AI SGAN+NF  LR V+E   +G  +EA+ A  MPEQ GSF +F  +LG   +TEF YR++ DK A V   VGV T  E E       +  +     +++  D+ K H+RYLMGGR + +NE L  F FPE+ G+L+KFL+    RWNISLFHYR  G    NIL G Q  + E AEF     +L Y +  VT   ++   +
Sbjct:  263 MVLVDSDEVCAAMKDLFENVRAVAEPSGALGLAGLKKYVKQNHIEGKNMAAILSGANLNFHTLRYVSERCEIGENREALLAVTMPEQPGSFLKFAYVLGNRAVTEFSYRYADDKRACVF--VGVRTTNEQEKADIIADLTKNGFDVEDMSDDDIAKTHVRYLMGGRAANDNERLYTFEFPEQKGALLKFLETLQNRWNISLFHYRAHGADYGNILAGFQIEQREQAEFEQGLAQLNYVFEDVTKSKSYRYFL 512          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_PASMU (Threonine dehydratase biosynthetic OS=Pasteurella multocida GN=ilvA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.203e-45
Identity = 96/244 (39.34%), Postives = 138/244 (56.56%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSDKAAVVLYSVGVHTVAELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRL-SVENEVLCRFIFPERXGSLMKFLDAF-SPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTD 738
            VVLV  D ICA++KD+FE  R+I EP                   G+ +V + SGAN+NF  LR V+E   +G Q EA+ A  +PEQ GSF +FC +LG + +TEFKYR++ DK A +   V +    E + +  +++ +     +L+  D+ K H+RY++GGR  S   E L  F FPE+ G+L+KFL+      WNIS+FHYR  G    N+L G Q    +L  F+    +LGY Y  VT+
Sbjct:  261 VVLVDGDEICAAVKDIFENVRAIAEPSGALSLAGLKKYVKEHNIQGETLVNVLSGANLNFHTLRYVSERCEIGEQHEALLAVTIPEQPGSFLKFCHILGHVPVTEFKYRYADDKQACIFVGVRITGQEEKQTIINQLQQNGYDLIDLSNDDIAKTHVRYMIGGRSNSPLKERLYSFEFPEQKGALLKFLETLGQTHWNISVFHYRAHGADYGNVLAGFQLNDEDLDAFNQHLEKLGYVYQDVTE 504          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THDH_ARXAD (Threonine dehydratase, mitochondrial OS=Arxula adeninivorans GN=ILV1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.091e-40
Identity = 99/252 (39.29%), Postives = 134/252 (53.17%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXX---SGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFS------SDKAAVVLYSVGVHTV-AELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVENEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTD 738
            +VLVS D ICA+IKD+F E RSI+EP                     S     AI SGANM+FD+LR V+E A +G   E      +PE+ GSF +  +L+ P  +TEF YR+S      SD  A V  S  V    AE+  + +  + +     +++ ++  K H RYL+G    V NE + RF FPER G+L+KFL     +WNI+LFHYR QG   A +L GI  P +E  +F    + L Y YA  TD
Sbjct:  288 IVLVSTDEICAAIKDVFTETRSIVEPAGALSVAGLVKYVESHPEIDHSASGYTAILSGANMDFDRLRFVSERAKLGEGSEVFIVATIPEKPGSFGKLIDLVHPRAVTEFSYRYSNGELEKSDGKAHVYISFSVDNAKAEVPRILDDFKGAGFDAIDISHNEFPKSHPRYLVGANQPVTNERVFRFEFPERPGALVKFLHGVKSKWNITLFHYRNQGSDIAKVLAGISVPSHESDQFQQFLDNLEYPYAEETD 539          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_ECOLI (Threonine dehydratase biosynthetic OS=Escherichia coli (strain K12) GN=ilvA PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.770e-39
Identity = 94/254 (37.01%), Postives = 136/254 (53.54%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSDKAAVVLYSVGVHTVAELEAMQE---RMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVE-NEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTDYNNFELLM 762
            ++ V  DAICA++KD+FE+ R++ EP                   G+ +  I SGAN+NF  LR V+E   +G Q+EA+ A  +PE+ GSF +FC+LLG  ++TEF YRF+  K A +   VGV     LE  +E    +        +L+  ++ K H+RY++GGR S    E L  F FPE  G+L++FL+     WNISLFHYR  G     +L   +   +E  +F  R N LGYD    T+   F   +
Sbjct:  262 IITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIF--VGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGDHE-PDFETRLNELGYDCHDETNNPAFRFFL 512          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THD1_SALTY (Threonine dehydratase biosynthetic OS=Salmonella typhimurium GN=ilvA PE=3 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.338e-38
Identity = 90/240 (37.50%), Postives = 131/240 (54.58%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXSGKNVVAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSDKAAVVLYSVGVHTVAELEAMQE---RMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVE-NEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYD 720
            ++ V  DAICA++KD+FE+ R++ EP                   G+ +  + SGAN+NF  LR V+E   +G Q+EA+ A  +PE+ GSF +FC+LLG   +TEF YRF+  K A +   VGV     LE  +E   ++        +L+  ++ K H+RY++GGR S    E L  F FPE  G+L+KFL      WNISLFHYR  G     +L   +   +E  +F  R + LGY+
Sbjct:  262 IITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHVLSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRMVTEFNYRFADAKNACIF--VGVRVSQGLEERKEIITQLCDGGYSVVDLSDDEMAKLHVRYMVGGRPSKPLQERLYSFEFPESPGALLKFLHTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHE-PDFETRLHELGYE 498          
BLAST of EY684585 vs. ExPASy Swiss-Prot
Match: THDH_YEAST (Threonine dehydratase, mitochondrial OS=Saccharomyces cerevisiae GN=ILV1 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.691e-37
Identity = 91/255 (35.69%), Postives = 133/255 (52.16%), Query Frame = 1
Query:   13 VVLVSRDAICASIKDMFEEKRSILEPXXXXXXXXXXXXXXXXXXS---GKNV-VAITSGANMNFDKLRVVTELANVGRQQEAVFATVMPEQSGSFKQFCELLGPMNITEFKYRFSSD---------KAAVVLYSVGVHTVAELEAMQERMESSQLKTYNLTQSDLVKDHLRYLMGGRLSVENEVLCRFIFPERXGSLMKFLDAFSPRWNISLFHYRGQGETGANILVGIQGPKNELAEFHGRANRLGYDYAGVTD 738
            VVLV+ D ICA++KD+FE+ RSI+EP                       KN  V I SGANMNFD+LR V+E A +G  +E      +P+  G+FK+  +++ P ++TEF YR++           KA +      V    E++ + +++ +   +  +++ ++L K H RYL+GG   V NE +  F FPER G+L +FL   S  WN++LFHYR  G     +L GI  P  E   F      LGY Y   TD
Sbjct:  312 VVLVNTDEICAAVKDIFEDTRSIVEPSGALSVAGMKKYISTVHPEIDHTKNTYVPILSGANMNFDRLRFVSERAVLGEGKEVFMLVTLPDVPGAFKKMQKIIHPRSVTEFSYRYNEHRHESSSEVPKAYIYTSFSVVDREKEIKQVMQQLNALGFEAVDISDNELAKSHGRYLVGGASKVPNERIISFEFPERPGALTRFLGGLSDSWNLTLFHYRNHGADIGKVLAGISVPPRENLTFQKFLEDLGYTYHDETD 566          
The following BLAST results are available for this feature:
BLAST of EY684585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
THD1_ARATH1.988e-9973.31Threonine dehydratase biosynthetic, chloroplastic ... [more]
THD1_SOLTU1.441e-5747.90Threonine dehydratase biosynthetic (Fragment) OS=S... [more]
THD1_SOLLC3.925e-5546.53Threonine dehydratase biosynthetic, chloroplastic ... [more]
THD1_BURM13.323e-5446.22Threonine dehydratase biosynthetic OS=Burkholderia... [more]
THD1_HAEIN3.012e-4740.87Threonine dehydratase biosynthetic OS=Haemophilus ... [more]
THD1_PASMU8.203e-4539.34Threonine dehydratase biosynthetic OS=Pasteurella ... [more]
THDH_ARXAD2.091e-4039.29Threonine dehydratase, mitochondrial OS=Arxula ade... [more]
THD1_ECOLI1.770e-3937.01Threonine dehydratase biosynthetic OS=Escherichia ... [more]
THD1_SALTY3.338e-3837.50Threonine dehydratase biosynthetic OS=Salmonella t... [more]
THDH_YEAST3.691e-3735.69Threonine dehydratase, mitochondrial OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-H07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684585 ID=EY684585; Name=EY684585; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGTGTAGTTCTTGTAAGCCGCGATGCCATTTGTGCCTCCAT
AAAGGACATGTTTGAGGAGAAAAGGAGCATTTTAGAACCTGCAGGTGCCC
TTGCCCTTGCCGGAGCCAAAGCATATTGTAAATATTATGGCCTTAGCGGA
AAAAATGTTGTAGCAATAACCAGTGGAGCAAACATGAACTTTGATAAACT
GAGGGTGGTGACAGAACTTGCCAATGTTGGTAGGCAACAGGAAGCTGTGT
TTGCAACTGTCATGCCAGAGCAGTCCGGGAGTTTCAAACAATTTTGTGAA
CTTTTGGGGCCTATGAATATCACTGAGTTCAAATACCGATTTAGTTCTGA
TAAAGCAGCTGTGGTTCTCTACAGTGTTGGCGTTCACACGGTTGCTGAAC
TTGAAGCAATGCAAGAGCGAATGGAGTCTTCTCAACTTAAAACCTACAAT
CTCACACAAAGTGACTTGGTTAAAGATCACCTGAGATATTTGATGGGGGG
CAGATTAAGTGTTGAAAACGAGGTCCTTTGTCGTTTTATTTTCCCTGAGC
GGNCTGGTTCTTTGATGAAGTTCTTGGATGCTTTCAGTCCGCGTTGGAAT
ATTAGCTTGTTCCATTACCGTGGTCAGGGTGAAACTGGTGCCAACATATT
AGTAGGAATCCAGGGTCCAAAGAATGAGCTGGCTGAATTTCACGGTCGTG
CCAACAGGCTTGGATATGATTATGCAGGTGTAACTGATTACAACAACTTC
GAGCTTTTGATGCACTGATTAAAGCTTGTTTGGGGAAAATAACTCCGATG
GAATTGCAAAGAAGACGCGCCTCATTAGCCGGAAAAGAAAGGAAAAGAGG
ACGAGGAAAGCGGAGGGCCTCTAAAATCTTAATACCCTTATTAGTCGAGA
ATAGGGGATCCCGTCCTGTACGTGA
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