EY684583

Overview
NameEY684583
Unique NameEY684583
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684583 vs. ExPASy Swiss-Prot
Match: CING_CALJA (Cingulin OS=Callithrix jacchus GN=CGN PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.892e-12
Identity = 67/249 (26.91%), Postives = 120/249 (48.19%), Query Frame = 2
Query:   11 IEDLTQKLTSEVQGLQTQISAIMEENISLNETYQNAKNELQSVISQLEAQLNEKKATEETLKSEIESL--KAQAAEKFALKTRIKELEELLVNVETQFKE---EVENVKVSAAGKEAELNSQLEDHAHEVKDRNALYEQVIQLQRELQIAQTAIAEQRGAYSQKDSE------RKAALKSSLEELGAKNQETALLQNEIANLEQKLQQAQG*AEPGHARTLHQK*RMRQKIKSQKHWVKAFPTPSEGKE 724
            +E   QK+++ V+GLQ ++    EE       +Q  K EL++   +L     EK+  EE L  +IE L  + + A   A  TR  E+ + L   + + KE   E ++ +V+   ++ EL  QL     E      L EQ  QLQ+ LQ  +    E   A    ++E      R+AA++++L E   +N E    +  I  LEQ+L++ +G  + G A     + ++ Q+++++K  ++     S+ +E
Sbjct:  539 LEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKLCQTQEELKELQAERQSQEVAGRHRDRELEKQLSVLRVEADRGRELEEQNFQLQKTLQQLRQNCEEASKAKMVAEAEAAVLGQRRAAVETTLRETQEENDE---FRRRILGLEQQLKETRGLVDGGEAVEARLRDKL-QRLEAEKQQLEEALNASQEEE 783          
BLAST of EY684583 vs. ExPASy Swiss-Prot
Match: CING_PAPAN (Cingulin OS=Papio anubis GN=CGN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11
Identity = 64/250 (25.60%), Postives = 122/250 (48.80%), Query Frame = 2
Query:   11 IEDLTQKLTSEVQGLQTQISAIMEENISLNETYQNAKNELQSVISQLEAQLNEKKATEETLKSEIESLKAQAAEKFALKTRIKELEEL---LVNVETQFKE---EVENVKVSAAGKEAELNSQLEDHAHEVKDRNALYEQVIQLQRELQIAQTAIAEQRGAYSQKDSE------RKAALKSSLEELGAKNQETALLQNEIANLEQKLQQAQG*AEPGHARTLHQK*RMRQKIKSQKHWVKAFPTPSEGKE 724
            +E   QK+++ V+GLQ ++    EE       +Q  K +L++   +L     EK+  EE L  +IE L+ +  +  A     +++E L   L+  + + KE   E ++ +V+   ++ EL  QL     E      L EQ +QLQ+ LQ  +    E   A    ++E      R+AA++++L E   +N E    +  I  LEQ+L++ +G  + G A     + ++ Q+++++K  ++     S+ +E
Sbjct:  537 LEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLQTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEAAVLGQRRAAVETTLRETQEENDE---FRRRILGLEQQLKETRGLVDGGEAVEARLRDKL-QRLEAEKQQLEEALNASQEEE 782          
BLAST of EY684583 vs. ExPASy Swiss-Prot
Match: CING_HUMAN (Cingulin OS=Homo sapiens GN=CGN PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11
Identity = 64/250 (25.60%), Postives = 122/250 (48.80%), Query Frame = 2
Query:   11 IEDLTQKLTSEVQGLQTQISAIMEENISLNETYQNAKNELQSVISQLEAQLNEKKATEETLKSEIESLKAQAAEKFALKTRIKELEEL---LVNVETQFKE---EVENVKVSAAGKEAELNSQLEDHAHEVKDRNALYEQVIQLQRELQIAQTAIAEQRGAYSQKDSE------RKAALKSSLEELGAKNQETALLQNEIANLEQKLQQAQG*AEPGHARTLHQK*RMRQKIKSQKHWVKAFPTPSEGKE 724
            +E   QK+++ V+GLQ ++    EE       +Q  K +L++   +L     EK+  EE L  +IE L+ +  +  A     +++E L   L+  + + KE   E ++ +V+   ++ EL  QL     E      L EQ +QLQ+ LQ  +    E   A    ++E      R+AA++++L E   +N E    +  I  LEQ+L++ +G  + G A     + ++ Q+++++K  ++     S+ +E
Sbjct:  537 LEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLRTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEATVLGQRRAAVETTLRETQEENDE---FRRRILGLEQQLKETRGLVDGGEAVEARLRDKL-QRLEAEKQQLEEALNASQEEE 782          
BLAST of EY684583 vs. ExPASy Swiss-Prot
Match: CING_CALMO (Cingulin OS=Callicebus moloch GN=CGN PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 63/252 (25.00%), Postives = 122/252 (48.41%), Query Frame = 2
Query:   11 IEDLTQKLTSEVQGLQTQISAIMEENISLNETYQNAKNELQSVISQLEAQLNEKKATEETLKSEIESL-------KAQAAEKFALKTRIKELEELLVNVETQFKEEVENVKVSAAGKEAELNSQLEDHAHEVKDRNALYEQVIQLQRELQIAQ---TAIAEQRGAYSQKDS----ERKAALKSSLEELGAKNQETALLQNEIANLEQKLQQAQG*AEPGHARTLHQK*RMRQKIKSQKHWVKAFPTPSEGKE 724
            +E   QK+++ V+GLQ ++    EE       +Q  K EL++   +L     EK+  EE L  +IE+L       +A A +   ++   KEL      +E + + E ++ +V+   ++ EL  QL     E      L EQ  QLQ+ LQ  +      ++ RG  ++ ++    +R+ A++++L E    N E   L+  +  LEQ+L++ +G  + G A     + ++ Q++++ K  ++     S+ +E
Sbjct:  537 LEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEELRATKQELLQLRMEKEEMEEELGEKIEALQRELEQARASAGDARQVEVLKKELRRAQEELE-ELQAERQSQEVAGRHRDRELEKQLAGLRVEADRGRELEEQNFQLQKTLQQLRHDCEEASKARGMAAEAEATVLGQRRGAVEAALRETQGDNDE---LRRRVLGLEQQLRETRGLVDGGEAAEARLRDKL-QRLEADKQRLEEALNASQEEE 783          
The following BLAST results are available for this feature:
BLAST of EY684583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CING_CALJA6.892e-1226.91Cingulin OS=Callithrix jacchus GN=CGN PE=3 SV=2[more]
CING_PAPAN1.535e-1125.60Cingulin OS=Papio anubis GN=CGN PE=3 SV=1[more]
CING_HUMAN1.535e-1125.60Cingulin OS=Homo sapiens GN=CGN PE=1 SV=2[more]
CING_CALMO3.420e-1125.00Cingulin OS=Callicebus moloch GN=CGN PE=3 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-H04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684583 ID=EY684583; Name=EY684583; organism=Citrus sinensis; type=EST; length=911bp
TCAAGAGGCTATAGAAGATTTGACACAGAAGCTTACCTCTGAAGTGCAGG
GACTACAAACTCAGATTTCTGCCATTATGGAAGAGAATATTAGCCTTAAT
GAAACATATCAAAATGCTAAGAATGAACTTCAGTCTGTGATATCACAGCT
TGAAGCACAATTGAATGAGAAGAAAGCAACTGAAGAAACTCTCAAGTCTG
AGATAGAAAGTCTTAAAGCTCAGGCTGCTGAAAAGTTTGCATTGAAAACT
CGCATCAAAGAACTTGAAGAATTGTTGGTGAATGTCGAAACTCAATTCAA
AGAAGAGGTTGAAAACGTCAAGGTTTCTGCTGCTGGTAAAGAGGCAGAAC
TAAATTCACAATTAGAGGATCATGCACATGAAGTCAAGGACCGAAATGCA
TTATATGAACAAGTGATTCAACTTCAGAGAGAGTTACAGATTGCTCAGAC
AGCAATTGCTGAACAGAGAGGGGCATATTCTCAAAAGGACAGTGAGCGAA
AGGCAGCTCTGAAGAGTTCTCTTGAAGAGCTTGGAGCTAAGAACCAAGAA
ACTGCACTTCTACAGAACGAAATTGCAAACCTTGAGCAGAAATTACAACA
AGCTCAGGGCTAAGCTGAACCAGGGCACGCCAGGACACTCCATCAAAAGT
GAAGGATGCGCCAGAAAATCAAATCCCAAAAACATTGGGTCAAGGCTTTT
CCGACGCCATCGGAAGGAAAGGAACGAGAAAGGTGAAAGCCAGCAGGTTC
AAACGTCATCTAACCCCGAAAGATCCCTAACCGCACGGAAACGAGGTGGC
TCTCCTGGTAATGGGGGCTTCAGCGTCTCCTCTTGTGGGATGGAGGCCCG
TGGGGTTCCTGCGGATGCCTTGGGGCGTAAAGTCCTGCGGGGGAGAGCCA
AGAAGATAGGA
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