EY684550

Overview
NameEY684550
Unique NameEY684550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9926 contig Csv1_Contig9926:1..423. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684550 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.976e-17
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 2
Query:   77 MIYDVNSPLFRSFLSQKGGASDKRKMEEQRPKEQRPKTNENKPVMTE 217
            MIYDVNSPLFRSFLSQKGG+SDKRK EEQ+PKE RPK +ENKP+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47          
The following BLAST results are available for this feature:
BLAST of EY684550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU1.976e-1785.11Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684550 ID=EY684550; Name=EY684550; organism=Citrus sinensis; type=EST; length=431bp
TGCCGACCCACGCGTCCGGGAACTAGGGTTTCCTTTTCCGATACAGGAAT
CCTACGGTGATAATTCATAATCAACAATGATCTACGACGTGAACTCTCCT
CTCTTCCGTTCCTTCCTCAGCCAGAAGGGCGGCGCTTCTGACAAGAGGAA
AATGGAAGAGCAAAGGCCAAAAGAACAAAGACCCAAAACAAATGAGAACA
AGCCTGTCATGACAGAGTGAGAGTTGCGTTTTGCTTGTAATGCTTCAGTG
ATGAGATAGAAGTAGTACGGTTCAGTGGTCACAGTCATCCAAATGTAACT
GATTCTGATTTTCCTTGGTTTATGGGTTTGTAGTGGTCTGTGTTTGGATT
TGGATGTTTCTTGTGGAACAAAAAATGTTTGGTAGTGCTATTATGCATTT
AATATATTATTAAGGAAAAAAAAAAAAAAAA
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