EY684547

Overview
NameEY684547
Unique NameEY684547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PCAB_PSEAE (3-carboxy-cis,cis-muconate cycloisomerase OS=Pseudomonas aeruginosa GN=pcaB PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 6.194e-105
Identity = 191/254 (75.20%), Postives = 215/254 (84.65%), Query Frame = -3
Query:    1 ARSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQAQLVSEGLE 762
            A   +  G    D M +GLVLQLR A  L+E DL R  ++LA QA+R+  TPLAGRTWLQHATPVTLGMK+AG LGA+TR RQRL EL+PRLLVLQFGGASGTLAALGEQA+PVA ALA EL L +PEQPWHTQRDRLVEFASVLGL+AGSLGK GRD+SLLMQTEA EVFEP+  G+GGSSTMPHKRNPV +AVLI+AATR PGLV+T+F+AMPQEHERSLGLWHAEWETLPE+C LV+GAL QA  + EGLE
Sbjct:  100 AERYVHLGATSQDAMDSGLVLQLRRALALLEQDLQRLAEVLADQAERHADTPLAGRTWLQHATPVTLGMKLAGLLGALTRHRQRLRELRPRLLVLQFGGASGTLAALGEQALPVAAALAEELGLALPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPAGAGRGGSSTMPHKRNPVSSAVLIAAATRAPGLVSTLFAAMPQEHERSLGLWHAEWETLPELCCLVAGALQQAIGLLEGLE 353          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PCAB_PSEPU (3-carboxy-cis,cis-muconate cycloisomerase (Fragment) OS=Pseudomonas putida GN=pcaB PE=1 SV=3)

HSP 1 Score: 375.555 bits (963), Expect = 1.993e-103
Identity = 187/254 (73.62%), Postives = 212/254 (83.46%), Query Frame = -3
Query:    1 ARSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQAQLVSEGLE 762
            A   +  G    D M TGLVLQLR A +LIE DL +  D L+ QA ++  TP+ GRTWLQHATPVTLGMK+AG LGA+TR RQRL EL P       GGASG+LAALG +AMPVA+ALA +L+L +PEQPWHTQRDRLVEFASVLGL+AGSLGK GRD+SLLMQTEA EVFEPSAPGKGGSSTMPHKRNPVGAAVLI AATRVPGLV+T+F+AMPQEHERSLGLWHAEWETLP+IC LVSGAL QAQ+++EG+E
Sbjct:   96 AERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPMVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELGPPCWCCSSGGASGSLAALGSKAMPVAEALAEQLKLSLPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLVSTLFAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGIE 349          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PCAB_BRAJA (3-carboxy-cis,cis-muconate cycloisomerase OS=Bradyrhizobium japonicum GN=pcaB PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.925e-67
Identity = 130/264 (49.24%), Postives = 175/264 (66.29%), Query Frame = -3
Query:    1 SANSFPRNIFARSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQAQLVSEGLE 792
            +AN    +  A   + +G    DV+ T  +L LR+A + ++ DL+R     AA A+ +  T +  RTWLQHA P+  G+K A +  ++ R+R RL  L    L LQFGGA+GTLAALG++ + VA+ LA EL L +PE PWHT RDR+ E AS L ++AGS GK+ RD+SL+MQT+ AE FEP+  G+GGSSTMPHKRNPV AA  +  AT  P L AT+F+A  Q+HERS G WHAEW TLP++  + SGAL     ++EGL+
Sbjct:   89 TANVAKADAEAARYVHWGATSQDVIDTATMLTLRAAIDALDADLSRAIKGFAALARNHRNTAMVARTWLQHALPMPFGLKAAEYAASLARARCRLRRLSRDGLALQFGGAAGTLAALGDKGLVVAERLAQELNLPLPEAPWHTHRDRIAEAASALAILAGSCGKIARDVSLMMQTDVAEAFEPAGEGRGGSSTMPHKRNPVAAASALGCATMAPQLAATIFAAQVQDHERSAGPWHAEWPTLPQLMLVTSGALAAIVDIAEGLD 352          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PCAB_ACIAD (3-carboxy-cis,cis-muconate cycloisomerase OS=Acinetobacter sp. (strain ADP1) GN=pcaB PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 3.925e-67
Identity = 125/248 (50.40%), Postives = 174/248 (70.16%), Query Frame = -3
Query:    1 FGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQAQLVSEGLE 744
            +G    D++ T  +LQ R A  ++++ + +  +   +QAQ Y    + GRTWLQ A P+TLG K+A W  A  R   R++ +K R+LV Q GGA G+LA+L +Q   V +A A +L+LG     WH +RDR+VE ASVLG+I G++GK+ RD SL+MQTE AEVFEP+A G+GGSSTMPHKRNPV AA +++AA RVP L+++++ +M QEHERSLG WHAEW +LPEI +L +GAL +   V +G+E
Sbjct:  103 WGATSQDILDTACILQCRDALAIVQNQVQQCYETALSQAQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGGAVGSLASLQDQGSIVVEAYAKQLKLGQTACTWHGERDRIVEIASVLGIITGNVGKMARDWSLMMQTEIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQSMVQEHERSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGME 350          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: YBN5_SCHPO (Uncharacterized protein C8E4.05c OS=Schizosaccharomyces pombe GN=SPBC8E4.05c PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.269e-49
Identity = 105/248 (42.34%), Postives = 147/248 (59.27%), Query Frame = -3
Query:    1 FGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQAQLVSEGLE 744
            +G    DV  +  V Q+  +F++I+  L +  ++      ++  T +AGR+ LQ A P+T G K+A ++  + R  QRL EL PR+ VL+FGGA GTLA+L  + + V Q LA EL L  PE  WHT+RDR+ E    LG++ G+L K   DI LLMQTE AEVFEP    +G SSTMP KRNP+    + ++ + V   VA +  AM ++HER+ G W  EW  LP++     G L Q   + EGLE
Sbjct:  104 WGATTQDVTDSATVRQMIDSFKIIKGYLEKAIELATVLVIKHRETTMAGRSNLQQAVPITFGFKMARFVATLRRHHQRLCELLPRVSVLEFGGACGTLASLENKGLMVQQKLAEELGLLQPEIAWHTERDRIAEAGCFLGMLTGTLAKFATDIKLLMQTEVAEVFEPFKANRGSSSTMPQKRNPISCVYITASTSFVRQGVAALLDAMVEDHERATGAWEIEWIVLPDVFVHTVGTLKQTVFLLEGLE 351          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_STAES (Adenylosuccinate lyase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=purB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.920e-31
Identity = 87/247 (35.22%), Postives = 133/247 (53.85%), Query Frame = -3
Query:   28 RSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQ---RDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQ 759
            R  + +G   +DV+ T L   ++ A E++E DL R+ D+LAA+A++Y  T + GRT   HA P T G+K+A W   + R+ +R  E++  + V +  GA GT A +     P  +A   E  LG+      TQ   RDR   + + L LIA S+ K   +I  L +TE  EV E  A G+ GSS MPHKRNP+G+  +   +  + G + T +  +P  HER +    AE   LP++   +  AL++
Sbjct:   85 RKWVHYGLTSTDVVDTALSYVIKQANEILEKDLERFIDVLAAKAKKYQYTLMMGRTHGVHAEPTTFGVKMALWYTEMKRNLKRFKEVRKEIEVGKMSGAVGTFANIP----PEIEAYVCE-HLGIDTAAVSTQTLQRDRHAYYIATLALIATSMEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENIPLWHERDISHSSAERIMLPDVTIALDYALNR 326          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_STAEQ (Adenylosuccinate lyase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=purB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.920e-31
Identity = 87/247 (35.22%), Postives = 133/247 (53.85%), Query Frame = -3
Query:   28 RSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGVPEQPWHTQ---RDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQ 759
            R  + +G   +DV+ T L   ++ A E++E DL R+ D+LAA+A++Y  T + GRT   HA P T G+K+A W   + R+ +R  E++  + V +  GA GT A +     P  +A   E  LG+      TQ   RDR   + + L LIA S+ K   +I  L +TE  EV E  A G+ GSS MPHKRNP+G+  +   +  + G + T +  +P  HER +    AE   LP++   +  AL++
Sbjct:   85 RKWVHYGLTSTDVVDTALSYVIKQANEILEKDLERFIDVLAAKAKKYQYTLMMGRTHGVHAEPTTFGVKMALWYTEMKRNLKRFKEVRKEIEVGKMSGAVGTFANIP----PEIEAYVCE-HLGIDTAAVSTQTLQRDRHAYYIATLALIATSMEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENIPLWHERDISHSSAERIMLPDVTIALDYALNR 326          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_STAAW (Adenylosuccinate lyase OS=Staphylococcus aureus (strain MW2) GN=purB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = -3
Query:   28 RSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGV-PEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQ 759
            R  + +G   +DV+ T L   ++ A ++IE DL R+ D+LA +A+ Y  T + GRT   HA P T G+K+A W   + R+ QR  +++  + V +  GA GT A +  +   +   +   L +G  P      QRDR   + + L LIA SL K   +I  L +TE  EV E  A G+ GSS MPHKRNP+G+  +   +  + G + T +  +P  HER +    AE   LP++   +  AL++
Sbjct:   85 RKWVHYGLTSTDVVDTALSFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMQRNLQRFKQVREEIEVGKMSGAVGTFANIPPE---IESYVCKHLGIGTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNR 326          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_STAAS (Adenylosuccinate lyase OS=Staphylococcus aureus (strain MSSA476) GN=purB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = -3
Query:   28 RSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGV-PEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQ 759
            R  + +G   +DV+ T L   ++ A ++IE DL R+ D+LA +A+ Y  T + GRT   HA P T G+K+A W   + R+ QR  +++  + V +  GA GT A +  +   +   +   L +G  P      QRDR   + + L LIA SL K   +I  L +TE  EV E  A G+ GSS MPHKRNP+G+  +   +  + G + T +  +P  HER +    AE   LP++   +  AL++
Sbjct:   85 RKWVHYGLTSTDVVDTALSFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMQRNLQRFKQVREEIEVGKMSGAVGTFANIPPE---IESYVCKHLGIGTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNR 326          
BLAST of EY684547 vs. ExPASy Swiss-Prot
Match: PUR8_STAAR (Adenylosuccinate lyase OS=Staphylococcus aureus (strain MRSA252) GN=purB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 84/245 (34.29%), Postives = 130/245 (53.06%), Query Frame = -3
Query:   28 RSVMAFGRYQSDVMATGLVLQLRSAFELIEHDLARWGDILAAQAQRYGTTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLSELKPRLLVLQFGGASGTLAALGEQAMPVAQALAAELQLGV-PEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISAATRVPGLVATMFSAMPQEHERSLGLWHAEWETLPEICRLVSGALHQ 759
            R  + +G   +DV+ T L   ++ A ++IE DL R+ D+LA +A+ Y  T + GRT   HA P T G+K+A W   + R+ QR  +++  + V +  GA GT A +  +   +   +   L +G  P      QRDR   + + L LIA SL K   +I  L +TE  EV E  A G+ GSS MPHKRNP+G+  +   +  + G + T +  +P  HER +    AE   LP++   +  AL++
Sbjct:   85 RKWVHYGLTSTDVVDTALSFVIKQANDIIEKDLERFIDVLAEKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMQRNLQRFKQVREEIEVGKMSGAVGTFANIPPE---IESYVCKHLGIGTAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNR 326          
The following BLAST results are available for this feature:
BLAST of EY684547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PCAB_PSEAE6.194e-10575.203-carboxy-cis,cis-muconate cycloisomerase OS=Pseud... [more]
PCAB_PSEPU1.993e-10373.623-carboxy-cis,cis-muconate cycloisomerase (Fragmen... [more]
PCAB_BRAJA3.925e-6749.243-carboxy-cis,cis-muconate cycloisomerase OS=Brady... [more]
PCAB_ACIAD3.925e-6750.403-carboxy-cis,cis-muconate cycloisomerase OS=Acine... [more]
YBN5_SCHPO1.269e-4942.34Uncharacterized protein C8E4.05c OS=Schizosaccharo... [more]
PUR8_STAES5.920e-3135.22Adenylosuccinate lyase OS=Staphylococcus epidermid... [more]
PUR8_STAEQ5.920e-3135.22Adenylosuccinate lyase OS=Staphylococcus epidermid... [more]
PUR8_STAAW1.319e-3034.29Adenylosuccinate lyase OS=Staphylococcus aureus (s... [more]
PUR8_STAAS1.319e-3034.29Adenylosuccinate lyase OS=Staphylococcus aureus (s... [more]
PUR8_STAAR1.319e-3034.29Adenylosuccinate lyase OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684547 ID=EY684547; Name=EY684547; organism=Citrus sinensis; type=EST; length=851bp
TTCCAGCCCTTCACTCACCAGCTGCGCCTGATGCAATGCACCGGATACCA
GCCGGCAAATTTCCGGCAAGGTTTCCCACTCGGCGTGCCACAGGCCCAGG
CTGCGTTCGTGCTCCTGGGGCATGGCGCTGAACATTGTCGCTACCAGGCC
GGGCACGCGGGTCGCGGCGCTGATCAGCACGGCAGCGCCCACCGGGTTGC
GCTTGTGAGGCATGGTCGAAGAGCCGCCCTTGCCGGGAGCTGAGGGTTCG
AATACTTCCGCCGCTTCGGTCTGCATCAGCAGGCTGATGTCGCGGCCCAG
TTTGCCGAGACTACCGGCGATCAGGCCAAGCACCGAGGCAAACTCCACCA
GACGATCGCGCTGGGTGTGCCAAGGTTGCTCCGGCACGCCAAGCTGCAAC
TCGGCCGCCAAGGCTTGCGCCACCGGCATCGCCTGTTCGCCAAGGGCTGC
CAGGGTTCCGGAAGCACCGCCAAATTGCAGCACCAGCAAACGCGGCTTGA
GTTCACTCAGGCGCTGCCGACTTCGGGTGACTGCGCCGAGCCAGCCGGCG
ATTTTCATGCCCAGGGTGACCGGCGTCGCATGTTGCAGCCACGTCCGGCC
AGCCAAAGGAGTTGTCCCATAACGCTGAGCCTGGGCGGCAAGAATGTCAC
CCCAACGCGCCAGATCGTGTTCGATCAACTCGAACGCGCTGCGCAGTTGC
AGCACCAAGCCGGTGGCCATAACATCTGACTGGTAGCGTCCAAAGGCCAT
TACGCTCCGGGCAAAAATATTCCTGGGGAATGAATTTGCAGAGGGCCTGC
ACAAGGAATCCGCAAATGCGCGCCGGGAGACAGCTTACAGAGGACGGCAC
C
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