EY684540

Overview
NameEY684540
Unique NameEY684540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: LPAT2_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.225e-68
Identity = 126/171 (73.68%), Postives = 144/171 (84.21%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKP 519
            PR +GFVSAVS+MRSFVPAIYD+TVAIPK+SP PTM+RLFKGQ SV+HVH+K H MK+LPE +D +AQWCRD FVAKDALLDKH A DTF  Q+ Q I RP KSL VV+SWA L+  G +KFL WS+L SSWKGIA SAFGLGI+T+ MQILIR SQSERSTPAKV P+KP
Sbjct:  201 PRTKGFVSAVSNMRSFVPAIYDMTVAIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPEPEDEIAQWCRDQFVAKDALLDKHIAADTFPGQKEQNIGRPIKSLAVVVSWACLLTLGAMKFLHWSNLFSSWKGIALSAFGLGIITLCMQILIRSSQSERSTPAKVAPAKP 371          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: LPAT2_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 9.384e-68
Identity = 126/182 (69.23%), Postives = 149/182 (81.87%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKP-NSKEPEQTTQ 549
            PR + FVSAVS+MRSFVPAIYD+TV IPK+SP PTM+RLFKGQ SV+HVH+K H MK+LPE+DDA+AQWCRD FVAKDALLDKH A DTF  Q+ Q I RP KSL VV+SWA ++  G +KFL W+ L SSWKGI  SA GLGI+T+ MQILIR SQSERSTPAKVVP+KP ++  PE ++Q
Sbjct:  201 PRTKSFVSAVSNMRSFVPAIYDMTVTIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPESDDAIAQWCRDQFVAKDALLDKHIAADTFPGQQEQNIGRPIKSLAVVLSWACVLTLGAIKFLHWAQLFSSWKGITISALGLGIITLCMQILIRSSQSERSTPAKVVPAKPKDNHHPESSSQ 382          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: LPAT2_BRAOL (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica oleracea GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 6.083e-67
Identity = 125/174 (71.84%), Postives = 144/174 (82.76%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSKPNSK 528
            PR +GFVSAVS+MRSFVPAIYD+TVAIPK+SP PTM+RLFKGQ SV+HVH+K H MK+LPE++D +AQWCRD FVAKDALLDKH A DTF  Q+ Q I RP KSL VV+SWA L+  G +KFL WS+L SS KGIA SA GLGI+T+ MQILIR SQSERSTPAKV P+KP  K
Sbjct:  202 PRTKGFVSAVSNMRSFVPAIYDMTVAIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPESEDEIAQWCRDQFVAKDALLDKHIAADTFPGQKEQNIDRPIKSLAVVVSWACLLTLGAMKFLHWSNLFSSLKGIALSALGLGIITLCMQILIRSSQSERSTPAKVAPAKPKDK 375          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: LPAT_MAIZE (1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays GN=PLS1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.462e-54
Identity = 97/170 (57.06%), Postives = 135/170 (79.41%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAKVVPSK 516
            PR +GFVSAVS MR FVPAIYD TV +PK SP PTM+R+ KGQSSV+HV +KRH M E+P++D+ V++WC+D+FVAKDALLDKH A  TF D+E++ I RP KSLLV + W+ L++FG ++F +W+ LLS+W+G+AF+A G+ +VT +M + I FSQ+ERS+ A+   ++
Sbjct:  202 PRTKGFVSAVSIMRDFVPAIYDTTVIVPKDSPQPTMLRILKGQSSVIHVRMKRHAMSEMPKSDEDVSKWCKDIFVAKDALLDKHLATGTF-DEEIRPIGRPVKSLLVTLFWSCLLLFGAIEFFKWTQLLSTWRGVAFTAAGMALVTGVMHVFIMFSQAERSSSARAARNR 370          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: LPAT3_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.567e-49
Identity = 91/165 (55.15%), Postives = 123/165 (74.55%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGLGIVTVLMQILIRFSQSERSTPAK 501
            PR +GFVSAVS +RSFVPAIYD T+ +  + P PT++R+F GQSS +++ ++RH M ELPETDD +AQWC+D+F+ KDA L+K+  +D FSD E+ +I RP K L+VVI W   ++FG  K LQW S+++SWK I    F L I T+ MQILI+ S+S+RSTPAK
Sbjct:  202 PRTKGFVSAVSEIRSFVPAIYDCTLTVHNNQPTPTLLRMFSGQSSEINLQMRRHKMSELPETDDGIAQWCQDLFITKDAQLEKYFTKDVFSDLEVHQINRPIKPLIVVIIWLGFLVFGGFKLLQWLSIVASWKIILLFVFFLVIATITMQILIQSSESQRSTPAK 366          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: PLCD_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Pongo abelii GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.734e-11
Identity = 38/140 (27.14%), Postives = 77/140 (55.00%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAF 426
            PR +GF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++++PE DD  + W   ++  KDA  +++    TF +  +   PR   +L+  + WASLV++   +FL   S++ S   +  ++F
Sbjct:  206 PRTKGFAITVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMVP-PRRPWTLVNWLFWASLVLYPFFQFL--VSMIRSGSSLTLASF 341          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: PLCD_MACFA (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Macaca fascicularis GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.734e-11
Identity = 38/140 (27.14%), Postives = 77/140 (55.00%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAF 426
            PR +GF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++++PE DD  + W   ++  KDA  +++    TF +  +   PR   +L+  + WASLV++   +FL   S++ S   +  ++F
Sbjct:  206 PRTKGFAITVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDRCSAWLHKLYQEKDAFQEEYYRTGTFPETPMVP-PRRPWTLVNWLFWASLVLYPFFQFL--VSMIRSGSSLTLASF 341          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: PLCD_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Homo sapiens GN=AGPAT4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.734e-11
Identity = 38/140 (27.14%), Postives = 77/140 (55.00%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAF 426
            PR +GF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++++PE DD  + W   ++  KDA  +++    TF +  +   PR   +L+  + WASLV++   +FL   S++ S   +  ++F
Sbjct:  206 PRTKGFAITVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMVP-PRRPWTLVNWLFWASLVLYPFFQFL--VSMIRSGSSLTLASF 341          
BLAST of EY684540 vs. ExPASy Swiss-Prot
Match: PLCD_BOVIN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Bos taurus GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.074e-11
Identity = 37/142 (26.06%), Postives = 80/142 (56.34%), Query Frame = 1
Query:    7 PRVRGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVAKDALLDKHNAEDTFSDQELQEIPRPKKSLLVVISWASLVIFGVLKFLQWSSLLSSWKGIAFSAFGL 432
            PR +GF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++E+PE +D  A W   ++  KDA  ++++   TF +  +   PR   +L+  + WAS++++   +F+   +++SS   +  ++F L
Sbjct:  206 PRTKGFAVTVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEEVPEEEDKCAAWLHKLYQEKDAFQEEYSRTGTFPETPVVP-PRRPWTLVNWLFWASMLLYPFFRFV--INMVSSGSSLTLASFVL 343          
The following BLAST results are available for this feature:
BLAST of EY684540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
LPAT2_BRANA3.225e-6873.681-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_ARATH9.384e-6869.231-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_BRAOL6.083e-6771.841-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT_MAIZE3.462e-5457.061-acyl-sn-glycerol-3-phosphate acyltransferase PLS... [more]
LPAT3_ARATH2.567e-4955.151-acyl-sn-glycerol-3-phosphate acyltransferase 3 O... [more]
PLCD_PONAB4.734e-1127.141-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_MACFA4.734e-1127.141-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_HUMAN4.734e-1127.141-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_BOVIN8.074e-1126.061-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684540 ID=EY684540; Name=EY684540; organism=Citrus sinensis; type=EST; length=949bp
TCCGACCCACGCGTCCGGGGATTTGTTTCAGCAGTGAGTCATATGCGCTC
ATTTGTCCCAGCCATTTACGATGTAACAGTAGCCATTCCTAAGAGTTCAC
CTGCACCTACAATGATCAGACTCTTCAAGGGCCAATCTTCTGTGATGCAC
GTGCACCTCAAAAGGCATTTGATGAAGGAATTGCCTGAAACAGATGATGC
TGTTGCACAATGGTGTAGAGATATGTTCGTGGCCAAGGATGCACTTTTGG
ACAAACATAATGCAGAAGACACATTTAGTGACCAAGAGTTGCAGGAAATT
CCCCGGCCAAAAAAATCACTTCTGGTCGTTATCTCCTGGGCATCTCTGGT
AATATTTGGGGTTCTGAAGTTTCTTCAGTGGTCTTCACTTTTATCCTCAT
GGAAGGGCATTGCATTTTCGGCATTTGGCTTGGGTATTGTCACCGTTCTG
ATGCAGATCTTAATTCGCTTTTCCCAGTCAGAGCGTTCTACCCCTGCCAA
GGTCGTCCCATCAAAGCCCAACAGCAAAGAGCCGGAGCAGACCACACAAG
ACAAACATCGGTAAATCAGTGCTTGATACTCAAGTTTTTGGTGCAAGAGG
AAACTCATAGACAACTATATTTTTGCGAACTTATGATACATGTANGTTAT
GAGATCTACTTCGAGTAACTTAGTCGTGCATTTCTGTTTCAAATCATGTC
TAGCTATGGCTTTGATACCGGTGTGACCGCATTTTGTAAGCACATCAAAT
CATTATTTGCTGGTTATTCAGGGTAATTTTGTATAGACTGTATTTAAAAC
TGGCTGTTCTAGCAGTGCTCCGGTTAACTAGACCTCATGATACTTTTAAG
TGGCCGTTGATCATATGGAACTCGCCCGGATATTTGAATATCAAGAATGC
TGCTTCTTTGGCGCAATTTGCTTGTCTTGGAAAGGGACTTCAATTTGTT
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