EY728287

Overview
NameEY728287
Unique NameEY728287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11724 contig Csv1_Contig11724:1..521. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY728287 vs. ExPASy Swiss-Prot
Match: YGB0_YEAST (Uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Saccharomyces cerevisiae GN=YGL010W PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 52/151 (34.44%), Postives = 76/151 (50.33%), Query Frame = 3 
Query:    6 YAAYHRDPRNIASHFIGIPLIXXXXXXXXSRPEWTVAGLWLSPAVLLALFSAWFYLRLELALGVLMTVLMGLSVWAGHVLAAQSTLVWLSSGIGMFVVGWVIQFVGH-YYEGRKPAFVDD-VSGLIVGPLFVVAELAFLVGLRHDLKRQIE 452
            Y  YH +P+N+  H I +P I         R +     + L+ AVL  LFS  FY  L L  G+L  VL+ L   A   L      +     +G+F +GW+ QFVGH  +E R+PA +D+ V  L++ P F++ E  F +G    LK  +E
Sbjct:   15 YKFYHHNPKNVLIHSIFVPTILFSGSCMLHRVK-IYQSISLT-AVLSVLFSI-FYCLLYLPTGLLAGVLLLLLNLA---LIDHRVDLTFKQELGLFTIGWIFQFVGHGVFEKRRPALIDNLVQSLVLAPYFIMFEFLFKLGFMPRLKATLE 159
The following BLAST results are available for this feature:
BLAST of EY728287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGB0_YEAST3.172e-1234.44Uncharacterized endoplasmic reticulum membrane pro... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-H02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728287 ID=EY728287; Name=EY728287; organism=Citrus sinensis; type=EST; length=521bp
GTCAATACGCCGCCTACCACCGCGACCCGCGCAACATCGCCAGCCACTTT
ATCGGCATCCCGCTGATTGTGGTGGCGGTGGCCGTGCTGCTGTCGCGCCC
CGAATGGACGGTGGCCGGGCTCTGGCTGTCGCCTGCGGTGCTGCTGGCAC
TGTTCTCGGCGTGGTTCTATTTGCGCCTGGAGCTGGCACTCGGTGTGCTG
ATGACGGTGCTGATGGGCCTGTCGGTGTGGGCCGGGCATGTGCTGGCGGC
GCAAAGCACGCTGGTGTGGCTGAGCAGCGGCATCGGCATGTTCGTGGTGG
GCTGGGTGATCCAGTTTGTGGGGCATTACTACGAGGGGCGCAAGCCGGCG
TTTGTCGATGACGTGTCCGGGTTGATCGTGGGGCCGTTGTTTGTGGTGGC
GGAGTTGGCGTTTCTGGTGGGGCTGCGGCATGACCTGAAGCGGCAGATTG
AAGAGCGTTCGGGGCCGGTGGCCGTGCGGCACAAGAACGCCACGGCCTGA
CAAGCAACACAGCTTAAAATT
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