EY709052

Overview
NameEY709052
Unique NameEY709052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY709052_ssr16 microsatellite EY709052_ssr16:16..29. BLAST: Citrus ESTs to Prunus persica proteins V1
EY709052_ssr115 microsatellite EY709052_ssr115:115..129. BLAST: Citrus ESTs to Prunus persica proteins V1
EY709052_ssr176 microsatellite EY709052_ssr176:176..187. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.461e-57
Identity = 114/178 (64.04%), Postives = 131/178 (73.60%), Query Frame = 1
Query:  181 AADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNK-EMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTF 711
            AAD +MLQDVCVADL S +KVNGFPCK NF+  DF S  ++KP ATNN FGS VT ANV+ +PGLNTLGVSLARIDYAPGGINPPHTHPRA+E+VFV+EG+LDVGF TTANVLVSK I KGE FV PRG  HFQKN  E+           +     I  TLF + PP+ ++V   TF
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTF 209          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.110e-56
Identity = 112/178 (62.92%), Postives = 130/178 (73.03%), Query Frame = 1
Query:  181 AADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNK-EMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTF 711
            AAD +MLQDVCVADL S +KVNGFPCK NF+  DF S  ++KP ATNN FGS VT ANV+ +PGLNTLGVSLARIDYAPGGINPPHTHPRA+E+VFV+EG+LDVGF TTANVLVSK I KGE FV PRG  HFQKN  ++           +     I  TLF + P + ++V   TF
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTF 209          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.504e-54
Identity = 101/140 (72.14%), Postives = 117/140 (83.57%), Query Frame = 1
Query:  175 TAAADPEMLQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKN 588
            +++ADP+MLQD+CVADL S IK+NGFPCK  A  +  DFFS  LAKP  TNNTFG+ VT ANV TIPGLNTLGVSL+RIDYAPGG+NPPHTHPRATE+VFVLEG LDVGF TTAN L+S+S+KKG+ F  P+G  HFQKN
Sbjct:   20 SSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKN 159          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.864e-53
Identity = 106/178 (59.55%), Postives = 126/178 (70.79%), Query Frame = 1
Query:  181 AADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNKEMXXXXXXXXXXXVARDSK-IAPTLFASIPPLGENVSINTF 711
            A DP+MLQDVCVADL SP+K+NGFPCKAN +  DFF   L  P  TNN  GS VTAANVQ+ PG+NTLGVS+ARIDYAPGG NPPHTHPRATEI+FVLEG L+VGF TTAN L +K++  GE FV PRG  HFQ+N+               + ++ IA TLFA+ PP+  +V    F
Sbjct:   24 AGDPDMLQDVCVADLASPVKLNGFPCKANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAF 201          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.378e-52
Identity = 110/186 (59.14%), Postives = 126/186 (67.74%), Query Frame = 1
Query:  181 AADPEMLQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNKEMXXXXXXXXXXXVARDSKIAP-TLFASIPPLGENVSINTFPTWT*E 729
            AAD + LQD+CVAD  S I VNGF CK  +N +  DFFS+ L K  ATNNTFGS VT ANVQ IPGLNTLGVS+ARIDYAPGG+NPPHTHPRATE+VFVLEGQLDVGF TT N L++K+I KGE FV P+G  HFQKN                  +   P TLF + PP+ +NV    F   T E
Sbjct:   20 AADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKE 205          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.024e-52
Identity = 108/187 (57.75%), Postives = 127/187 (67.91%), Query Frame = 1
Query:  181 AADPEMLQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKN--KEMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTFPTWT*E 729
            A DP+ LQD+CVAD TS IKVNGF CK  +N +  DFF   + KPA  NNT GS VT ANV+ I GLNTLGVSLARIDYAPGG+NPPHTHPRATE++FVLEG+LDVGF TTAN L +K++KKGE FV PRG  H+QKN  K             +     IA TLF + P + ++V   TF   T E
Sbjct:   21 AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKE 207          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.669e-51
Identity = 103/186 (55.38%), Postives = 127/186 (68.28%), Query Frame = 1
Query:  175 TAAADPEMLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNK-EMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTFPTWT*E 729
            + A DP++LQD+CVADLTS +KVNGF CKA  +E DF+   LA    TNNT+GS VT ANV+ +PGLNTLGVS++RIDYAPGG+NPPHTHPRATE+VFVL+G LDVGF TTAN L +K+I  G+ FV PRG  HFQKN  +            +     +A TLFA+ P + + V    F   T E
Sbjct:   23 STAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKE 208          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.259e-50
Identity = 104/180 (57.78%), Postives = 126/180 (70.00%), Query Frame = 1
Query:  181 AADPEMLQDVCVADLTSPIKVNGFPCKA--NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNK-EMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTF 711
            A DP+ LQD+CVAD +   K+NGFPCK   N +E DFF   ++KPA  N+T GS VT ANV+ IPGLNTL VSLARIDYAPGG+NPPHTHPRATE+V+VLEG+L+VGF TTAN L +K+IK GE FV PRG  HFQKN  +            +   + +A TLFA+ P L E+V   TF
Sbjct:   22 AYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTF 201          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.988e-47
Identity = 99/183 (54.10%), Postives = 120/183 (65.57%), Query Frame = 1
Query:  181 AADPEMLQDVCVAD---LTSPIKVNGFPCKA--NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNK-EMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTF 711
            A DP+MLQDVCVAD   L  P+++NGFPCK   N +  DFF D L K   T N  GS VTAA+V+++PGLNT+GVS+ARIDYAP G+NPPHTHPRATEI+FV+EG LDVGF TTAN L ++++ KGE FV PRG  HFQKN               +     IA  LF + PPL  +     F
Sbjct:   22 AGDPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAF 204          
BLAST of EY709052 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.875e-45
Identity = 96/183 (52.46%), Postives = 117/183 (63.93%), Query Frame = 1
Query:  181 AADPEMLQDVCVAD---LTSPIKVNGFPCKA--NFSEMDFFSDKLAKPAATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVCPRGCGHFQKNK-EMXXXXXXXXXXXVARDSKIAPTLFASIPPLGENVSINTF 711
            A DP+MLQDVCVAD   L  P+++NG PCK   N +  DFF D L     T N  GS VTAA+V+ +PGLNT+GVS+ARIDYAP G++PPHTHPRATEI+FV EG LDVGF TTAN L ++++ KGE FV PRG  HFQ+N               +     IA TLF + PPL  +     F
Sbjct:   22 AGDPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAF 204          
The following BLAST results are available for this feature:
BLAST of EY709052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
NEC1_NICLS1.461e-5764.04Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
NEC1_NICPL2.110e-5662.92Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL21_ARATH7.504e-5472.14Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL11_ORYSJ4.864e-5359.55Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
RHRE_PEA5.378e-5259.14Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL24_ARATH7.024e-5257.75Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL52_ORYSJ2.669e-5155.38Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH2.259e-5057.78Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL13_ORYSJ3.988e-4754.10Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ4.875e-4552.46Putative germin-like protein 3-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-105-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709052 ID=EY709052; Name=EY709052; organism=Citrus sinensis; type=EST; length=787bp
CCACGCGTCCGCTTTTCTCTCTCTCTCTCTTTCTCCATCTCTATCTTTTC
TTCTTTCTTTATCTTCGCCTGCAGCAATAACAAGATCATAATTGAACTTA
CTTTTGTAACCATGGCTGCTGCTGCTGCTGGTGCTTTGACACTTTTTGTT
GTCACTGTTGCTGTGATCTTGAACACTGCTGCTGCTGATCCCGAAATGCT
TCAAGATGTTTGTGTGGCAGACCTCACTTCCCCTATTAAAGTCAATGGGT
TCCCCTGCAAAGCAAACTTTTCAGAGATGGACTTTTTCTCAGACAAATTA
GCAAAGCCAGCAGCCACAAACAACACGTTTGGTTCAACAGTAACAGCAGC
CAATGTCCAAACAATCCCAGGCCTAAATACTCTTGGTGTCTCACTCGCAC
GCATTGACTATGCCCCCGGCGGCATAAACCCGCCGCACACGCACCCCCGT
GCCACCGAGATCGTCTTTGTCCTCGAGGGTCAACTCGACGTAGGCTTCTT
CACTACTGCCAACGTTTTGGTATCGAAATCCATCAAAAAGGGTGAAAACT
TCGTGTGTCCAAGAGGGTGTGGGCATTTCCAGAAGAACAAGGAAATGTCC
CTGCTTCCGTTATCGCCGCTTTACTACCCAGTCGCACGGGACTCAAAAAT
TGCTCCTACCTTGTTTGCATCTATCCCGCCACTAGGGGAAAACGTATCCA
TCAATACTTTCCCGACTTGGACCTAGGAAGCTGCGAACAATTAGCCAGCC
CCGCCCCCCAAAACAAACTAAAGCGACCGGCCTCGGT
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