EY709051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.360e-60 Identity = 117/179 (65.36%), Postives = 135/179 (75.42%), Query Frame = 3 Query: 111 GNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644 G SL DPE+ L+++EK RQCR +ELIASENF A +EALGS L NKYSEG PG RYYGG E +DEIE LC+ RAL+ F LDP QWGVNVQPYSGSPAN AAYTA+L+PHDRIMGLDLP GGHLTHG Y S KR ATSI+FES+ +++NP TG IDY + A FRP L + Sbjct: 45 GQESLSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHG-YMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLII 222
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 233.032 bits (593), Expect = 1.360e-60 Identity = 117/179 (65.36%), Postives = 135/179 (75.42%), Query Frame = 3 Query: 111 GNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644 G SL DPE+ L+++EK RQCR +ELIASENF S A +EALGS L NKYSEG PG RYYGG E +DEIE LC+ RAL+ F LDP QWGVNVQPYSGSPAN A YTA+L+PHDRIMGLDLP GGHLTHG Y S KR ATSI+FES+ +++NP TG IDY + A FRP L + Sbjct: 45 GQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHG-YMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLII 222
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.776e-60 Identity = 117/179 (65.36%), Postives = 135/179 (75.42%), Query Frame = 3 Query: 111 GNSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644 G SL DPE+ L+ +EK RQCR +ELIASENF S A +EALGS L NKYSEG PG RYYGG E +DEIE LC+ RAL+ F LDP QWGVNVQPYSGSPAN AAYTA+L+PHDRIMGLDLP GGHLTHG Y S KR ATSI+FES+ +++NP TG IDY + A F+P L + Sbjct: 45 GQESLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHG-YMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLII 222
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.504e-59 Identity = 114/178 (64.04%), Postives = 141/178 (79.21%), Query Frame = 3 Query: 114 NSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644 N S+ DPEI+ L+ KEK+RQ +ELIASENFTS AV+E++GS TNKY+EG+PG RYYGGNE +D++ENLC RAL+TF+L+P +WGVNVQPYSGS ANFAA+T +L+PHDRIMGLDLPSGGHLTHGY T K+ ATSI+FES+ +QVN TGY+DY + A FRP L + Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTD-KKKISATSIFFESMPYQVN-ETGYVDYNKMEANAALFRPKLLI 206
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.317e-58 Identity = 113/197 (57.36%), Postives = 142/197 (72.08%), Query Frame = 3 Query: 66 PENGKKEKMDPVNEWG---NSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644 P+ +K +P W NS LE +DPEI +IE EK RQ + +ELI SENFTS +V++A+GS +TNKYSEG PG RYYGGNE+ID E LC+ RAL+ F LDP +WGVNVQP SGSP+NF YTA+L+PHDRIM LDLP GGHL+HGY T K+ A SI+FE++ ++++ STGYIDY + A FRP L V Sbjct: 34 PDEAVYDKENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIV 229
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.407e-57 Identity = 108/159 (67.92%), Postives = 126/159 (79.25%), Query Frame = 3 Query: 123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY 599 L+ D E++ +I+KE RQ +ELIASENF S AV+EALGS L NKYSEG PG RYYGG E IDE+E LC+ RALQ + LDP WGVNVQPYSGSPANFA YTA++EPH RIMGLDLP GGHLTHG+ T K+ ATSI+FES+A++VNP TGYIDY Sbjct: 26 LKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTD-KKKISATSIFFESMAYKVNPDTGYIDY 183
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.407e-57 Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 3 Query: 123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY 599 L+ D E++ +I+KE RQ +EL ASENF S AV+EALGS L NKYSEG PG RYYGG EFIDE+E LC+ RALQ + LDP WGVNVQPYSGSPANFA YTA++EPH RIMGLDLP GGHLTHG+ T G K+ ATSI+FES+ ++VNP TGYI+Y Sbjct: 26 LKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMT-GKKKISATSIFFESMPYKVNPDTGYINY 183
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.838e-57 Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 3 Query: 123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY 599 L+ D E++ +I+KE RQ +ELIASENF S AV+EALGS+L NKYSEG PG RYYGG EFIDE+E LC+ RALQ +HLDP WGVNVQPYSGSPANFA YTA++EPH RIMGLDLP GGHLTHG+ T K+ ATSI+FES+ ++V P TGYI+Y Sbjct: 20 LKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSSLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTD-KKKISATSIFFESMPYKVYPETGYINY 177
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.401e-57 Identity = 115/197 (58.38%), Postives = 139/197 (70.56%), Query Frame = 3 Query: 66 PENGKKEKMDPVNEWG---NSSLETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY-IIGGEALDFRPNLTV 644 P EK P W N+ LE VDPEI +IE EK RQ + +ELI SENFTS +V++A+GS +TNKYSEG PG RYYGGNE+ID E LC+ RAL+ F LDP +WGVNVQP SGSPANF YTA+L+ HDRIM LDLP GGHL+HGY T K+ A SI+FE++ +++N STGYIDY + A FRP L V Sbjct: 34 PSEAVYEKERPGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 229
BLAST of EY709051 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.401e-57 Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 3 Query: 123 LETVDPEIHYLIEKEKRRQCRAIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKRYRATSIYFESLAHQVNPSTGYIDY 599 L+ D E++ +I+KE RQ +ELIASENF S AV+EALGS L NKYSEG PG RYYGG EFIDE+E LC+ RALQ + LDP WGVNVQPYSGSPANFA YTA++EPH RIMGLDLP GGHLTHG+ T K+ ATSI+FES+ ++VNP TGYI+Y Sbjct: 26 LKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTD-KKKISATSIFFESMPYKVNPDTGYINY 183 The following BLAST results are available for this feature:
BLAST of EY709051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY709051 ID=EY709051; Name=EY709051; organism=Citrus sinensis; type=EST; length=769bpback to top |