EY709050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.381e-74 Identity = 138/144 (95.83%), Postives = 143/144 (99.31%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYGE 433 RLKPQEEKAEEDRSKVDDLRG+PMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGL+AQI+EIKEAVELPL HPELYEDIGIKPPKGVILYGE Sbjct: 87 RLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGE 230
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.381e-74 Identity = 138/144 (95.83%), Postives = 143/144 (99.31%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYGE 433 RLKPQEEKAEEDRSKVDDLRG+PMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGL+AQI+EIKEAVELPL HPELYEDIGIKPPKGVILYGE Sbjct: 87 RLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGE 230
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 5.922e-71 Identity = 131/144 (90.97%), Postives = 141/144 (97.92%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYGE 433 RL+P E+K EEDRSKVDDLRG+PMSVG+LEE+IDE+HAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGLDAQI+EIKEAVELPL HPELYEDIGI+PPKGVILYGE Sbjct: 92 RLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGE 235
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 7.256e-61 Identity = 111/143 (77.62%), Postives = 133/143 (93.01%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 RLKPQ+EK EE+RSKVDDLRG+PMSVGNLEE+ID+NHAIVS+SVG E+YV ILSFVDKDQLEPGC++L+++KV +VVG+L D+ DPMV+VMK+EKAP E+YADIGGLD QI+EIKE+VELPL HPE YE++GIKPPKGVILYG Sbjct: 83 RLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYG 225
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.402e-58 Identity = 102/143 (71.33%), Postives = 133/143 (93.01%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 RLKPQ+E+ +E+R++VD++RG+PMSVG LEE+ID++HAIVS++ GPEYYV I+SFVDKD LEPGC++L+H+K +S+VGLL D+ DPM++VMK++KAP ESYADIGGL++QI+EIKEAVELPL HPELYE++GIKPPKGVILYG Sbjct: 91 RLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYG 232
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.749e-58 Identity = 106/143 (74.13%), Postives = 130/143 (90.91%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 ++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QI+EIKE+VELPL HPE YE++GIKPPKGVILYG Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYG 226
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.749e-58 Identity = 106/143 (74.13%), Postives = 130/143 (90.91%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 ++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QI+EIKE+VELPL HPE YE++GIKPPKGVILYG Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYG 226
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.749e-58 Identity = 106/143 (74.13%), Postives = 130/143 (90.91%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 ++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QI+EIKE+VELPL HPE YE++GIKPPKGVILYG Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYG 226
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.281e-57 Identity = 105/143 (73.43%), Postives = 130/143 (90.91%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 ++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMK+EKAP E+YADIGGLD QI+EIKE+VELPL HPE YE++GIKPPKGVILYG Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYG 226
BLAST of EY709050 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.084e-56 Identity = 101/143 (70.63%), Postives = 131/143 (91.61%), Query Frame = 2 Query: 2 RLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIREIKEAVELPLNHPELYEDIGIKPPKGVILYG 430 RLKPQEE+ EE+R+KVD+LRG+PM+VG+LEE+ID+ HAIVS++VG E+YV I+SFVDK+QLEPGC++L+++K +V+G+L D+ DPMVSVMK+EKAP E+YAD+GGLD QI+EIKEAVELPL HPE YE++GI+PPKGVILYG Sbjct: 87 RLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYG 229 The following BLAST results are available for this feature:
BLAST of EY709050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >EY709050 ID=EY709050; Name=EY709050; organism=Citrus sinensis; type=EST; length=858bpback to top |