EY664158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX33_HUMAN (Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.678e-29 Identity = 67/170 (39.41%), Postives = 99/170 (58.24%), Query Frame = 3 Query: 15 EEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 EE + F S +GDH+TL+N+YR + + +K+ WCK+NF+NS+++ ++ +Q+R +M I+S D+ RRCLA S F++ A QP+GTY Q V IHPSSVLF KP C+V+ EL+ TN Y+R++ ID WL E AP+Y+ Sbjct: 543 EEVQGVRKKFISSEGDHMTLLNIYRTF------KNLGGNKD--------WCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYF 698
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.882e-29 Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 F +GDHLTL+ VY + K K WC +NFI +RSLR A+DI Q+ G +++ + SCG+ + ++ + + FF NAA K P+ YR L QVV IHPSS LF +PE +V++EL+ T +Y+R +T ID WL E AP ++ + + Sbjct: 1059 FHQTEGDHLTLLAVYNSW--------------KNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1209
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.882e-29 Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 F +GDHLTL+ VY + K K WC +NFI +RSLR A+DI Q+ G +++ + SCG+ + ++ + + FF NAA K P+ YR L QVV IHPSS LF +PE +V++EL+ T +Y+R +T ID WL E AP ++ + + Sbjct: 1035 FHQTEGDHLTLLAVYNSW--------------KNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1185
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.423e-28 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 3 Query: 15 EEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 + A F P+GDHLTL+ VY + K + WC +NFI RS++ A+DI Q+ G +++ + SCG D+ ++ + + FF NAA + P+ YR L GQ V IHPSS F+ +PE +V++EL+ T +Y+R +T ID WL E AP ++ Sbjct: 1001 DHADQKKAKFHQPEGDHLTLLAVYNSW--------------KNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFF 1156
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.203e-27 Identity = 61/178 (34.27%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 R + +A F P+GDHLTL+ VY A K + WC +NFI SRSLR A+D+ Q+ +++ + + G++ R+ + A FF + A K P+ YR L Q V IHPSS LF+ +P+ +++++L+ T +Y+R +T ID WL ELAP+++ + + Sbjct: 972 REKQAQADQKRAKFFQPEGDHLTLLAVYEAW--------------KAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.571e-27 Identity = 60/167 (35.93%), Postives = 92/167 (55.09%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN*N 542 F P+GDHLTL+NVY + K K WC +NF+ +RSLR A+D+ Q+ +++ I S G + ++ + + FF NA+ K P Y+ L GQ V IHPSS LF P+ ++++EL+ T +Y+R + ID WL ELAP+++ + N Sbjct: 978 FFQPEGDHLTLLNVYESW--------------KNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPN 1130
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX33_MOUSE (Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.571e-27 Identity = 63/170 (37.06%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 15 EEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 +E ++ F S +GDH+TL+N+YR + WCK+NF+NS+++ ++ +Q+R +M I S DM RRC+A S F+N A Q +GTY Q V IHPSSVLF KP C+V+ L+ TN Y+R++ +D WL E AP Y+ Sbjct: 534 DEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKD--------------WCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYF 689
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX16_PANTR (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes GN=DHX16 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24 Identity = 60/174 (34.48%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 + ++ A NA +F P GDHL L+NVY E +WC +NF+ RS+R ARD+ Q+ G +E++ +SSC D I R+ + A +F + A G YR + Q V IHP+S LF +P ++++EL+ T +++R + I+ WL E+AP YY Sbjct: 861 KDKVVHADNARVNFFLPGGDHLVLLNVYTQWAE--------------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1019
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX16_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24 Identity = 60/174 (34.48%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 + ++ A NA +F P GDHL L+NVY E +WC +NF+ RS+R ARD+ Q+ G +E++ +SSC D I R+ + A +F + A G YR + Q V IHP+S LF +P ++++EL+ T +++R + I+ WL E+AP YY Sbjct: 858 KDKVVHADNARVNFFLPGGDHLVLLNVYTQWAE--------------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1016
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae GN=PRP22 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.066e-24 Identity = 56/169 (33.14%), Postives = 95/169 (56.21%), Query Frame = 3 Query: 18 EARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 EA + F P GDHLTL+NVY ++ + ++CK NF++ R L+ ARD+ SQI +++G ++ SC D + R+ + FF+NAA + + Y+ + GG V IHPSS L+ + E ++++ ++ T+ +Y+ +T I+ WL E+AP +Y Sbjct: 945 EADSKKAKFHHPYGDHLTLLNVY--------------TRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY 1099 The following BLAST results are available for this feature:
BLAST of EY664158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664158 ID=EY664158; Name=EY664158; organism=Citrus sinensis; type=EST; length=933bpback to top |