EY664119

Overview
NameEY664119
Unique NameEY664119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe GN=cox12 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  349 DQEAS*ETPDIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            DQEA          T   D RFP TNQT+HCF  YI+Y RC+ AKGE    C +F   Y++LCP +W++ W+EQRENGTFP P+
Sbjct:    6 DQEAP---KQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTFPAPI 86          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: COX12_YEAST (Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae GN=COX12 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1
Query:  385 LETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            L T   D RFP  NQT+HC+  Y++YH+CV  KGE    C  F K Y ALCP DWI+ W++QRE G F G +
Sbjct:    9 LHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIFAGDI 80          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B1_HUMAN (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.001e-16
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  367 ETPDIKLETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            ET     +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    6 ETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B1_PONAB (Cytochrome c oxidase subunit 6B1 OS=Pongo abelii GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.045e-15
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  367 ETPDIKLETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            ET     +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    6 ETKLKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B1_MACMU (Cytochrome c oxidase subunit 6B1 OS=Macaca mulatta GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.365e-15
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  367 ETPDIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            ET     +TAP D RFP  NQTR+C+  Y+++HRC  A   KG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    7 ETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 87          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B1_MACFA (Cytochrome c oxidase subunit 6B1 OS=Macaca fascicularis GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.365e-15
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  367 ETPDIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            ET     +TAP D RFP  NQTR+C+  Y+++HRC  A   KG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    7 ETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 87          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B1_BOVIN (Cytochrome c oxidase subunit 6B1 OS=Bos taurus GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.971e-15
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  388 ETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP  W+  W+++R  GTFPG +
Sbjct:   13 QTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B1_TARSY (Cytochrome c oxidase subunit 6B1 OS=Tarsius syrichta GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 5.186e-15
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  388 ETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP  W+  W+++R  GTFPG +
Sbjct:   13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B2_RAT (Cytochrome c oxidase subunit 6B2 OS=Rattus norvegicus GN=Cox6b2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1
Query:  391 TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            T P D RFP  NQTR+C+  +++YHRCV     +G+    CD + + + +LCP  W+  WNEQ + GTFPG +
Sbjct:   16 TPPFDPRFPNQNQTRNCYQNFLDYHRCVKTMDRRGKNTQACDYYFRVFHSLCPVSWVQRWNEQIKQGTFPGKI 88          
BLAST of EY664119 vs. ExPASy Swiss-Prot
Match: CX6B2_HUMAN (Cytochrome c oxidase subunit 6B2 OS=Homo sapiens GN=COX6B2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 1
Query:  349 DQEAS*ETPDIKLETAPADFRFPTTNQTRHCFTRYIEYHRCV---AAKGEGAPECDKFAKYYRALCPSDWIDIWNEQRENGTFPGPL 600
            D EA  E P  K  T P D RFP+ NQ R+C+  +++YHRC+     +G+    C+ + + Y +LCP  W++ WNEQ +NG F G +
Sbjct:    3 DVEAQ-EPPKGKWSTPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88          
The following BLAST results are available for this feature:
BLAST of EY664119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
COX12_SCHPO1.558e-1951.19Cytochrome c oxidase subunit 6B OS=Schizosaccharom... [more]
COX12_YEAST9.451e-1751.39Cytochrome c oxidase subunit 6B OS=Saccharomyces c... [more]
CX6B1_HUMAN8.001e-1644.44Cytochrome c oxidase subunit 6B1 OS=Homo sapiens G... [more]
CX6B1_PONAB1.045e-1544.44Cytochrome c oxidase subunit 6B1 OS=Pongo abelii G... [more]
CX6B1_MACMU1.365e-1544.44Cytochrome c oxidase subunit 6B1 OS=Macaca mulatta... [more]
CX6B1_MACFA1.365e-1544.44Cytochrome c oxidase subunit 6B1 OS=Macaca fascicu... [more]
CX6B1_BOVIN3.971e-1543.24Cytochrome c oxidase subunit 6B1 OS=Bos taurus GN=... [more]
CX6B1_TARSY5.186e-1543.24Cytochrome c oxidase subunit 6B1 OS=Tarsius syrich... [more]
CX6B2_RAT1.509e-1443.84Cytochrome c oxidase subunit 6B2 OS=Rattus norvegi... [more]
CX6B2_HUMAN3.362e-1440.23Cytochrome c oxidase subunit 6B2 OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664119 ID=EY664119; Name=EY664119; organism=Citrus sinensis; type=EST; length=926bp
ATGTAGATCTGTTTTTGCCCATCAATGGCGGAAGCCCAAATCGACAAAAC
TCCCTCCCTAGCCGAGGATTATTTGTTGGAAAAAGAGAAGCAAGATGTAG
CTACAAAACCTGTGGAAGTAAAAGAAGTTGAGAGTGCAGTGACTGCCTCT
TCTGTGGAAGGTGCCACTGATAAAGTTGAAGAAACACCTGCTGCCGCCGC
TGTTGAAGAAAGCAAAGAAGACGCCCCTGCTCCTGCCCCTGAAGAAAGCA
CTGAAGCCAGTTCTGCTTCTCCTGAGGACAGCACTAGTGATACGGCTCCA
GCTGCTGCTGAGGAAAGCAGTGAAACTACGGAAGAGGAAAACTCAGGTGA
TCAGGAAGCCTCATAAGAGACACCAGATATAAAGCTGGAGACTGCACCGG
CAGATTTCCGTTTCCCAACCACAAATCAAACAAGGCACTGCTTTACCCGA
TATATTGAGTATCATCGGTGTGTAGCTGCTAAGGGAGAGGGTGCTCCAGA
GTGTGATAAATTTGCAAAATATTACCGTGCTCTATGCCCTAGTGACTGGA
TAGATATATGGAATGAGCAAAGAGAAAACGGAACCTTTCCAGGTCCTCTG
TAGGTGGGTGCCATTTTACGAACATGGGTGTGATTCGCATCCTGCGGGTA
AATTAATNGTGCTACTCATAANCATATGAGTNATTTCTTGACTGAGAAGT
GATTTCTCAGGGATCTTTTNCTAAAATCATGAGTTAATAATTTTTTTGAC
TNGCTAATAGTGTTGTCAAGTCTCATACACAGGGGTATCTCTTAAGATGA
ATTTTTTCTNCGCAGTGCACTTATGTTGGTGCGGGCATGTGGGGTATTTA
ATAGGTATNCGATGGACCCAACTGATCGTACATTATGTCTGCGGATAAGA
TGGCTCATAGCCTAAGAATGATGATT
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