EY664118

Overview
NameEY664118
Unique NameEY664118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10915 contig Csv1_Contig10915:64..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.295e-37
Identity = 82/148 (55.41%), Postives = 109/148 (73.65%), Query Frame = 3 
Query:  420 RSMVSFEDVHLANGSNNRPFFRPFDRDENGDEDL--DEYFHQ--PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKEK 851
            RSM++ E+      S  RPFF       +  EDL  D+++    PEKKRRLT +QV  LEKSFE ENKLEPERK QLAK LGLQP QVA+WFQNRRARWKTKQLE+DYD+L+++Y+ L ++YD++  + +K ++EV +LT+KLQ K++
Sbjct:   34 RSMMNMEET-----SKRRPFF-------SSPEDLYDDDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQE 169
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.286e-34
Identity = 74/129 (57.36%), Postives = 98/129 (75.97%), Query Frame = 3 
Query:  471 RPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKE 848
            RPFF         DE L+E ++    PEKKRRLT +QV  LE+SFE ENKLEPERK +LA+ LGLQP QVA+WFQNRRARWKTKQLE+D+D L+ S+++L+AD+D L ++  +  ++V++LT+KLQ KE
Sbjct:   55 RPFFT------TPDELLEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKE 177
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.286e-34
Identity = 74/129 (57.36%), Postives = 98/129 (75.97%), Query Frame = 3 
Query:  471 RPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKE 848
            RPFF         DE L+E ++    PEKKRRLT +QV  LE+SFE ENKLEPERK +LA+ LGLQP QVA+WFQNRRARWKTKQLE+D+D L+ S+++L+AD+D L ++  +  ++V++LT+KLQ KE
Sbjct:   57 RPFFT------TPDELLEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKE 179
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.301e-33
Identity = 73/135 (54.07%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  453 ANGSNNRPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKE 848
            A     RPFF   +      E L+E ++    PEKKRRLT +QVQ LE+SFE ENKLEPERK +LA+ LG+ P QVA+WFQNRRARWKTKQLE D+D L+ +Y++L AD+  L  + ++ +A+V++LT+KLQ KE
Sbjct:   58 AGAGAKRPFFTTHE------ELLEEEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKE 186
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.301e-33
Identity = 73/135 (54.07%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  453 ANGSNNRPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKE 848
            A     RPFF   +      E L+E ++    PEKKRRLT +QVQ LE+SFE ENKLEPERK +LA+ LG+ P QVA+WFQNRRARWKTKQLE D+D L+ +Y++L AD+  L  + ++ +A+V++LT+KLQ KE
Sbjct:   58 AGAGAKRPFFTTHE------ELLEEEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKE 186
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.062e-31
Identity = 67/102 (65.69%), Postives = 85/102 (83.33%), Query Frame = 3 
Query:  543 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKE 848
            EKKRRL+V+QV+ LE+SFEVENKLEPERK +LA+DLGLQP QVA+WFQNRRARWKTKQLE+DY  L++SY+SL+ D+D L ++K+   AE+  L  KL  +E
Sbjct:   50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEE 151
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.062e-31
Identity = 67/102 (65.69%), Postives = 85/102 (83.33%), Query Frame = 3 
Query:  543 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKE 848
            EKKRRL+V+QV+ LE+SFEVENKLEPERK +LA+DLGLQP QVA+WFQNRRARWKTKQLE+DY  L++SY+SL+ D+D L ++K+   AE+  L  KL  +E
Sbjct:   50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEE 151
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.366e-31
Identity = 65/98 (66.33%), Postives = 82/98 (83.67%), Query Frame = 3 
Query:  543 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKL 836
            EKKRRL+V+QV+ LE+SFE ENKLEPERK +LA+DLGLQP QVA+WFQNRRARWKTKQLE+DY  L+ SY++L+AD+D L ++K+   AE+  L  KL
Sbjct:   42 EKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKL 139
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.366e-31
Identity = 65/98 (66.33%), Postives = 82/98 (83.67%), Query Frame = 3 
Query:  543 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKL 836
            EKKRRL+V+QV+ LE+SFE ENKLEPERK +LA+DLGLQP QVA+WFQNRRARWKTKQLE+DY  L+ SY++L+AD+D L ++K+   AE+  L  KL
Sbjct:   42 EKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKL 139
[Close]
BLAST of EY664118 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.366e-31
Identity = 70/138 (50.72%), Postives = 93/138 (67.39%), Query Frame = 3 
Query:  459 GSNNRPFFRPFDRDENGDEDLDEYFHQ---PEKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLQPXQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKAKAEVLTLTDKLQVKEKRG*N 863
            GSN +     +D D    E+     H     EKKRRL VDQV+ LEK+FE+ENKLEPERK +LA++LGLQP QVA+WFQNRRARWKTKQLEKDY VL+  Y+SL+ ++D+L ++ +    E+  +  K+  +E    N
Sbjct:   27 GSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNN 164
The following BLAST results are available for this feature:
BLAST of EY664118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
HAT5_ARATH1.295e-3755.41Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
HOX16_ORYSJ2.286e-3457.36Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX16_ORYSI2.286e-3457.36Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX5_ORYSJ3.301e-3354.07Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX5_ORYSI3.301e-3354.07Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]
HOX4_ORYSJ1.062e-3165.69Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI1.062e-3165.69Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX20_ORYSJ2.366e-3166.33Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
HOX20_ORYSI2.366e-3166.33Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
ATB16_ARATH2.366e-3150.72Homeobox-leucine zipper protein ATHB-16 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-063-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664118 ID=EY664118; Name=EY664118; organism=Citrus sinensis; type=EST; length=940bp
CCGGNATTACACGCGCGACCCACGCGTCCGCAAACTTCTCACTTCTCCTG
AAACCTCTGACGAACCGCTCTTTCAAATCCTTATATTCTGAGTGATGGGT
ATGAGCAGCCGCTGCTCCCACACATCTCACATAACCGAGATCATAATCAC
CAGCTTCTTTCGTCATAAGTCTTAAATTAAATTTCTTCTCGACTGTTGAA
TCATCGCATCATCTTTAGCGATGGCTGCTTAAAAGATTAAGAATATTAGT
TTTAAGTTAAATGGCGGGTGGGAGGATGTATAATCAAAATAGTTCTAGTG
GTGGTGGTACTTCAAGTCTGTCCTTTCTGATTCAAAGCCAAAAGGGTTCT
TGCTCTAACTCTCAGAATCTTGATGCTTCGTTCCTCTCTGGCCCTTCTCC
TTCTCCTTTTCTTGGACCAAGATCCATGGTGAGCTTTGAAGATGTGCACT
TAGCAAATGGATCCAATAACAGGCCATTTTTCCGCCCATTTGATCGTGAT
GAAAATGGGGATGAGGACTTGGATGAGTACTTTCATCAACCTGAAAAGAA
AAGACGGCTCACGGTTGATCAAGTCCAGTTTCTTGAAAAAAGCTTCGAGG
TAGAGAACAAGCTTGAACCCGAAAGGAAAATTCAACTGGCAAAAGACCTT
GGCTTGCAGCCTANACAGGTTGCGATTTGGTTCCAAAACCGCCGGGCTCG
TTGGAAGACTAAACAGCTCGAGAAGGATTACGATGTATTGCAAAACAGCT
ATAATAGCCTTAAGGCCGATTATGACAATCTCTTCAAGGAGAAAGAAAAA
GCTAAAGCTGAGGTTCTTACGCTCACAGACAAGCTGCAGGTCAAAGAGAA
AAGAGGGTAAAACACAGNAATGCCTGTAGTAAACAGACATTGTCACAAGA
ACACCANCAATTTCANAACCTGTTGCTGATTCTGCTGNCT
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