EY663897

Overview
NameEY663897
Unique NameEY663897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY663897_ssr90 microsatellite EY663897_ssr90:90..101. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7876 contig Csv1_Contig7876:1..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.011e-68
Identity = 146/292 (50.00%), Postives = 180/292 (61.64%), Query Frame = 3
Query:   30 KMLNFCKLFIFIFLVSAAPLSSSSNAGSEYSQAECLKVPASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNGVQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKKNGPS*WWEM------P*CYIISGKRNLMAGGT 887
            K L    L    F  S  P +S S   ++  Q +CLKV A+ F  SLK T+DA+QQV  ++S FAN FGDFRL NAISDCLDLLDFSADEL WS+SASQN  G++N +G LSSDLRTWLSAAL+NQ+TC +GF+GTNSIV+G++S  L Q++S VQELLT VHP+ +Q                       Q P W K +DRKLL  +GV             FT + DAVLA  DYSM+R+VIYI+RG YK+N EIKKK      W +          IISG R+ + G T
Sbjct:   16 KQLLLLVLLCAFFSSSFIPFASCSI--TDDLQTQCLKVSATEFAGSLKDTIDAVQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLVQELLTQVHPNSNQ------------------QGPNGQIPSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKK-----WNLMMIGDGMDATIISGNRSFVDGWT 282          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 2.024e-56
Identity = 130/294 (44.22%), Postives = 169/294 (57.48%), Query Frame = 3
Query:   45 CKLFIFIFLVSAAPLSSSSNAGSEYSQAECLKVPASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHP-------SPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNGVQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKKNGPS*WWEMP------*CYIISGKRNLMAGGT 887
            C  +  I L+    +SS  N   +Y     LKVPAS F+SS+ T V  I+QV  ++S FA+  GD RL NA+SDCLDLLDFS++ELTWS SAS+NP G+ NG+GD+ SD RTWLSAAL NQ TC++GFDGT+ +VK +V+GSL+Q+ S ++ELL +V P       S                          QFP W + +DRKLL  NG              FTKIMDA+    DYS  RFVIYI++G+Y +N EIKKK      W +          +ISG R+ + G T
Sbjct:    3 CLKYFLILLMLGLCVSSEENFQYDY-----LKVPASEFVSSINTIVVVIRQVSSILSQFADFSGDRRLQNAVSDCLDLLDFSSEELTWSASASENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKK-----WNIVMLGDGIDVTVISGNRSFIDGWT 286          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 4.043e-56
Identity = 112/253 (44.27%), Postives = 157/253 (62.06%), Query Frame = 3
Query:   54 FIFIFLVSAAPLSSSSNAGSEYSQAECLKVPASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNGVQ-XXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKK 809
            F+F+ ++S       + + ++  Q ECL+VP   F  + KT VDAI + V ++S F    G  R++NAI DC+DLLD +A+EL+W ISASQ+P G+ N +GD+ SDLRTW+SAAL NQ+TC+DGF+GTN I+K +V+G L+++ ++V+ LLTMVH  PS+                       +FP W K  DRKLL  + +              FT I DAVLA  DYS KR+VI+++RGVY +N EIKKK
Sbjct:   13 FLFLIIISLCSAHKEAFSSTDLVQMECLRVPPLEFAEAAKTVVDAITKAVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSK----PKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKK 261          

HSP 2 Score: 22.3274 bits (46), Expect = 4.043e-56
Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2
Query:  803 EKEWTLLMVGDAMMLHHI-WETELDGGWDPFR 895
            +K+W ++MVGD +    I        GW  FR
Sbjct:  260 KKKWNIMMVGDGIDATVITGNRSFIDGWTTFR 291          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17
Identity = 74/272 (27.21%), Postives = 121/272 (44.49%), Query Frame = 3
Query:  144 PASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGR-----HNGSGDLSS---DLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQIS---SSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNG---VQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKKN----------GPS*WWEMP*CYIISGKRNLMAGGT 887
            P S   +++K   D  +  +  I     L    R   AI DC +L+ FS  EL WS+       G       +GS D ++   +L+TWLSAA+ NQ+TC++GF+GT    + ++ GSL Q++   S+V ++ T ++  P +                         P W    D  L++ +    +             +  I +A+    ++S KR+VIY+++GVYK+N ++KKK           G +         II+G RN M G T
Sbjct:   67 PHSVLRAAVKEAHDKAKLAMERIPTVMMLSIRSREQVAIEDCKELVGFSVTELAWSMLEMNKLHGGGGIDLDDGSHDAAAAGGNLKTWLSAAMSNQDTCLEGFEGTERKYEELIKGSLRQVTQLVSNVLDMYTQLNALPFK---------------ASRNESVIASPEWLTETDESLMMRHDPSVMHPNTVVAIDGKGKYRTINEAINEAPNHSTKRYVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQT---------IITGDRNFMQGLT 314          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16
Identity = 74/293 (25.26%), Postives = 123/293 (41.98%), Query Frame = 3
Query:    6 RPQSHISLKMLNFC-----KLFIFIFLVSAAP--LSSSSNAGSEYSQAECLKVPASSFMSSLKTT---------------VDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSG-SLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNG--VQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKK 809
            +  S IS K+L F       LF+ +FLV+     +  S+   +      CL   +    + + TT               V  +   +PV+S   N   D R   A++DCL+LLD S D ++ SI+A    T   +      ++ ++WLS  L N  TC+D  D   S  K +++G +L+++ S  +  L M+                             + P W    DRKL+  +G  +             +  + +AV A  D S  R+VIY++RG+YK+N E+  +
Sbjct:   14 KQNSIISFKILTFVVTLFVALFLVVFLVAPYQFEIKHSNLCKTAQDSQLCLSYVSDLMSNEIVTTDSDGLSILMKFLVNYVHQMNNAIPVVSKMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDKRTHSEH------ANAQSWLSGVLTNHVTCLDELD---SFTKAMINGTNLDELISRAKVALAML-------------ASVTTPNDDVLRPGLGKMPSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSR 284          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 82.4185 bits (202), Expect = 3.862e-15
Identity = 72/281 (25.62%), Postives = 119/281 (42.35%), Query Frame = 3
Query:   21 ISLKMLNFC-KLFIFIFLVSA--APLSSSSNAGSEYSQAECLKVPASSFMSSLKTT---------------VDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSG-SLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNG--VQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEI 800
            IS K+L+F   LF+ +FLV+     +  S+   +      CL   +    + + TT               V  +   +PV+    N   D R   A++DCL+LLD S D  + SI+A    +   +      ++ ++WLS  L N  TC+D  D   S  K +++G +L ++ S  +  L M+    +Q                       + P W    DRKL+  +G  +             +  + +AV A  D S  R+VIY++RG YK+N E+
Sbjct:   19 ISFKILSFVITLFVALFLVAPYQVEIKHSNLCKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEH------ANAQSWLSGVLTNHVTCLDELD---SFTKAMINGTNLEELISRAKVALAMLASLTTQ-------------DEDVFMTVLGKMPSWVSSMDRKLMESSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEV 277          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 56/187 (29.95%), Postives = 86/187 (45.99%), Query Frame = 3
Query:  243 RLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFD---GTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL--LVNGVQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKK 788
            R+ +A   CL+LLD S D LT ++S+    +G  +      SD+ TWLS+A+ N +TC DGFD   G    VK  V G++  +S  V   L +                              + P+W KREDR+LL    + +Q            F  I +A+    ++S +RFVIY++ G Y++
Sbjct:  136 RVRSAYDSCLELLDDSVDALTRALSSVVVVSGDES-----HSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFAGKVKD----LSGVPVVNNRKLLGTEETEELPNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEE 313          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 71/293 (24.23%), Postives = 120/293 (40.96%), Query Frame = 3
Query:    6 RPQSHISLKMLNFC-----KLFIFIFLVSAAP--LSSSSNAGSEYSQAECLKVPASSFMSSLKTT---------------VDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSG-SLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNG--VQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKK 809
            +  S IS K+L F       LF+ +FLV+     +  S+   +      CL   +    + + T+               V  +   +PV+    N   D R   A++DCL+LLD S D +  SI+A    +   +      ++ ++WLS  L N  TC+D  D   S  K +++G +L+++ S  +  L M+                             + P W    DRKL+  +G  +             +  + +AV A  D S  R+VIY++RG YK+N E+  +
Sbjct:   14 KQNSIISFKILTFVVTLFVALFLVVFLVAPYQFEIKHSNLCKTAQDSQLCLSYVSDLISNEIVTSDSDGLSILKKFLVYSVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEH------ANAQSWLSGVLTNHVTCLDELD---SFTKAMINGTNLDELISRAKVALAML-------------ASVTTPNDEVLRPGLGKMPSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSR 284          
BLAST of EY663897 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 57/214 (26.64%), Postives = 91/214 (42.52%), Query Frame = 3
Query:  255 AISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGF--DGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLVNGVQXXXXXXXXXXXXFTKIMDAVLAPEDYSMKRFVIYIQRGVYKKNGEIKKKNGPS*W-WEMP*CYIISGKRNLMAGGT 887
            A+ DCL+ +D + DEL  ++   +    + + S   + DL+T +SAA+ NQ TC+DGF  D  N  V+  +S     +       L M+                              +P W    DR+LL  + V             F  +  AV A      KR++I I+ GVY++N E+ KK+    +  +     II+G RN++ G T
Sbjct:  137 ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQH-ADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTD--TDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST 347          
The following BLAST results are available for this feature:
BLAST of EY663897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PME_PRUPE3.011e-6850.00Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME44_ARATH2.024e-5644.22Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME32_ARATH4.043e-5644.27Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME22_ARATH3.160e-1727.21Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME22_SOLLC2.048e-1625.26Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME1_SOLLC3.862e-1525.62Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME61_ARATH1.468e-1429.95Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME21_SOLLC1.468e-1424.23Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME1_CITSI9.845e-1126.64Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-060-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663897 ID=EY663897; Name=EY663897; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCAGTCTCATATATCCTTAAAGATGCTGAATTTTTGCAAG
CTCTTCATTTTTATTTTCTTGGTCAGTGCGGCCCCTTTGAGCAGCAGCAG
CAATGCGGGCTCGGAATATTCGCAGGCCGAGTGCTTGAAAGTGCCAGCCT
CCTCTTTCATGAGCTCTTTGAAGACCACCGTTGATGCCATTCAACAGGTG
GTTCCTGTTATTTCTAACTTTGCTAATTTGTTTGGTGATTTTCGTCTCAC
AAATGCTATATCAGACTGTCTTGATCTCCTTGATTTCTCTGCTGATGAGC
TCACCTGGTCCATCTCTGCTTCCCAAAATCCCACTGGAAGGCATAACGGC
AGTGGAGATCTAAGTTCAGACTTGAGAACTTGGTTAAGTGCTGCACTGAT
TAATCAGGAGACATGCATTGATGGGTTTGATGGCACCAATAGCATTGTCA
AAGGTGTGGTATCAGGTAGCCTTAACCAAATTTCTTCGTCGGTTCAAGAA
CTTCTAACAATGGTGCATCCTTCCCCCAGCCAATGGTCCAACGAGGGTAG
CAGCAGCAACAGCGGTGGCAAAAGTCGCGGCGGAGGGGGAAAATCAAGCG
GCCAATTTCCTCATTGGTTTAAGCGTGAAGATCGGAAATTGTTGCTCGTC
AATGGGGTGCAAGCTGATGTTGTGGTAGCAGCAGATGGTACAGGGACCTT
TACTAAGATAATGGATGCCGTGTTGGCACCAGAGGATTATAGTATGAAAA
GATTCGTGATTTACATCCAGAGGGGTGTGTATAAAAAGAATGGTGAAATT
AAGAAAAAGAATGGACCCTCCTGATGGTGGGAGATGCCATGATGCTACAT
CATATCTGGGAAACGGAACTTGATGGCGGGTGGGACCCTTTCAGGCAGCC
ACCTT
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