EY663528

Overview
NameEY663528
Unique NameEY663528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY663528_ssr152 microsatellite EY663528_ssr152:152..169. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7848 contig Csv1_Contig7848:1..944. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO1_PIG (Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Sus scrofa GN=FMO1 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 9.748e-17
Identity = 61/199 (30.65%), Postives = 93/199 (46.73%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDE---ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            V +VGAG SGLA+  C   + +     ER +    +W+            Y  +  +  K+    P  PFP  YP +V  + F+E+L  Y + FN+   I+++  V S +  E    T  W+V     L  G++    +    ++V +G  TNP+ P    L SF    T  G+  HS QYK+   +  K+VLVVG GN
Sbjct:    5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLWRFTEHVEEGRASLYKSVVSNSCKEMSCYPDFPFPEDYPNYVPNSHFLEYLRMYANQFNLLKCIQFKTKVCSVTKHEDFNTTGQWDVVT---LCEGKQESAVFDA--VMVCTGFLTNPYLP----LDSFPGINTFKGQYFHSRQYKHPDIFKDKSVLVVGMGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO1_HUMAN (Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Homo sapiens GN=FMO1 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 4.096e-15
Identity = 58/199 (29.15%), Postives = 90/199 (45.23%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQR---SVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            V +VGAG SGLA+  C   + +     ER +    +W+            Y  +  +  K+       PFP  YP +V  +QF+E+L  Y +HF++   I+++    SV   S    +  W V     ++   E +E      ++V +G  TNP+ P    L SF       G+  HS QYK+   +  K VLV+G GN
Sbjct:    5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLWRFTEHVEEGRASLYKSVVSNSCKEMSCYSDFPFPEDYPNYVPNSQFLEYLKMYANHFDLLKHIQFKTKVCSVTKCSDSAVSGQWEV-----VTMHEEKQESAIFDAVMVCTGFLTNPYLP----LDSFPGINAFKGQYFHSRQYKHPDIFKDKRVLVIGMGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO1_RABIT (Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Oryctolagus cuniculus GN=FMO1 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 3.467e-14
Identity = 56/196 (28.57%), Postives = 89/196 (45.41%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            V +VGAG SGLA+  C   + +     ER +    +W+            Y  +  +  K+       PFP  YP +V  +QF+++L  Y   F++  SI+++ +V S +  +  N+        L  G++    +    ++V +G  TNP  P    L  F    T  G+  HS QYK+   +  K VLVVG GN
Sbjct:    5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLWRFTEHVEEGRASLYKSVVSNSCKEMSCYSDFPFPEDYPNYVPNSQFLDYLKMYADRFSLLKSIQFKTTVFSITKCQDFNVSGQWEVVTLHEGKQESAIFDA--VMVCTGFLTNPHLP----LGCFPGIKTFKGQYFHSRQYKHPDIFKDKRVLVVGMGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO1_MOUSE (Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Mus musculus GN=Fmo1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.467e-14
Identity = 59/199 (29.65%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYD---EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            V +VGAG SGLA+  C   + +     ER +    +W+            Y  +  + +++    P  PFP  YP FV  + F+E+L  Y + FN+   I +   V S +       +  W V     ++ G++    +    ++V +G  TNP  P    L SF    T  GE  HS QYK+   +  K VLVVG GN
Sbjct:    5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSSDLGGLWRFTEHVEEGRASLYKSVVSNSSREMSCYPDFPFPEDYPNFVPNSLFLEYLKLYSTQFNLQRCIYFNTKVCSITKRPDFAVSGQWEVVT---VTNGKQNSAIFDA--VMVCTGFLTNPHLP----LDSFPGILTFKGEYFHSRQYKHPDIFKDKRVLVVGMGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO1_RAT (Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus GN=Fmo1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.721e-13
Identity = 58/199 (29.15%), Postives = 88/199 (44.22%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYD---EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            V +VGAG SGLA+  C   + +     ER      +W+            Y+ +  + +K+       PFP  YP FV  + F+E+L  Y + FN+   I +   V S +       +  W V     +  G++  + +    ++V +G  TNP  P    L SF    T  G+  HS QYK+   +  K VLVVG GN
Sbjct:    5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSCDLGGLWRFTEHVEEGRASLYNSVVSNSSKEMSCYSDFPFPEDYPNFVPNSLFLEYLQLYATQFNLLRCIYFNTKVCSITKRPDFAVSGQWEVVT---VCQGKQSSDTFDA--VMVCTGFLTNPHLP----LDSFPGIQTFKGQYFHSRQYKHPDVFKDKRVLVVGMGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO1_CANFA (Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Canis familiaris GN=FMO1 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13
Identity = 56/199 (28.14%), Postives = 86/199 (43.22%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQR---SVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            V +VGAG SGLA+  C   + +     ER +    +W+            Y  +  +  K+       PFP  YP +V  +QF+E+L  Y + F++   IR++     V        T  W V   +    G++    +    ++V +G  TNP  P    L  F    T  G+  HS QYK+   +  K VLV+G GN
Sbjct:    5 VAIVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLWRFTEHVEEGRASLYKSVVSNSCKEMSCYSDFPFPEDYPNYVPNSQFLEYLKMYANRFSLLKCIRFKTKVCKVTKCPDFTVTGQWEVVTQH---EGKQESAIFDA--VMVCTGFLTNPHLP----LDCFPGINTFKGQYFHSRQYKHPDIFKDKRVLVIGMGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO4_RAT (Dimethylaniline monooxygenase [N-oxide-forming] 4 OS=Rattus norvegicus GN=Fmo4 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13
Identity = 52/200 (26.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  196 EVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYD---EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            +V ++GAG SGL++  C   +++     ER + +  +WK            Y  L  ++ K+       PF   YP F+S  +F ++L  +  HF +   IR++ +V S +       T  W V      + G++    +    ++V +G+  +P  P    L SF       G+++HS +Y+    + GK +LVVG GN
Sbjct:    4 KVAVIGAGVSGLSSIKCCLDENLEPTCFERSSDFGGLWKFAEASEDGMTRVYRSLVTNVCKEMSCYSDFPFHEDYPNFMSHEKFWDYLREFAEHFGLLKYIRFKTTVRSVTKRPDFSETGQWEVVTE---TEGKQDRAVFDA--VMVCTGQFLSPRLP----LESFPGIHKFKGQILHSQEYRIPDAFRGKRILVVGLGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO5_HUMAN (Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Homo sapiens GN=FMO5 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13
Identity = 61/227 (26.87%), Postives = 102/227 (44.93%), Query Frame = 1
Query:  199 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASY--DEATN-MWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNLAWKLHWI*PTMPAKPL*LSVAR--WVI 837
            + ++G G SGL++  C   + +  V  ER +    +W+            Y  + ++ +K+       P P  YP F+  AQ +E+   Y   F++   IR++ +V S     D AT+  W V      S G++    + G  ++V +G  TN   P    L SF       G+  HS  YKN + + GK V+++G GN    L  +  +  AK + LS  R  W++
Sbjct:    6 IAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATSGQWEVVTE---SEGKKEMNVFDG--VMVCTGHHTNAHLP----LESFPGIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLA-VEISQTAKQVFLSTRRGAWIL 222          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO4_MOUSE (Dimethylaniline monooxygenase [N-oxide-forming] 4 OS=Mus musculus GN=Fmo4 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.457e-12
Identity = 52/200 (26.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  196 EVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYD---EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            +V ++GAG SGL++  C   +++     ER + +  +WK            Y  L  ++ K+       PF   YP F+S  +F ++L  +  HF +   IR++ +V S +       T  W+V      + G+     +    ++V +G+  +P  P    L SF       G+++HS +Y+    + GK +LVVG GN
Sbjct:    4 KVAVIGAGVSGLSSIKCCLDENLEPTCFERTSDFGGLWKFADTSEDGMTRVYRSLVTNVCKEMSCYSDFPFREDYPNFMSHEKFWDYLREFAEHFGLLRYIRFKTTVLSVTKRPDFSETGQWDVVTE---TEGKRDRAVFDA--VMVCTGQFLSPHLP----LESFPGIHKFKGQILHSQEYRIPDAFRGKRILVVGLGN 194          
BLAST of EY663528 vs. ExPASy Swiss-Prot
Match: FMO4_RABIT (Dimethylaniline monooxygenase [N-oxide-forming] 4 OS=Oryctolagus cuniculus GN=FMO4 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12
Identity = 52/200 (26.00%), Postives = 91/200 (45.50%), Query Frame = 1
Query:  196 EVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS---------YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYD---EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN 759
            +V ++GAG SGL +  C   + +     ER N    +WK            Y  L  ++ K+       PF   YP F+S ++F  +L  +  HF++   I+++ +V S +       T  W+V      + G++    +    ++V +G+  NP  P    L SF       G+++H  +YK  + + G+ VLV+G GN
Sbjct:    4 KVAVIGAGVSGLTSIKCCLDEDLEPTCFERSNDIGGLWKYTETSKDGMTRIYWSLVTNVCKEMSCYSDFPFQEDYPNFMSHSKFWNYLQEFAEHFDLLKYIQFKTTVCSVTKRPDFSKTGQWDVVTE---TEGKQHRAVFDA--VMVCTGKFLNPRLP----LESFPGILKFRGQILHCQEYKIPEGFRGQRVLVIGLGN 194          
The following BLAST results are available for this feature:
BLAST of EY663528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FMO1_PIG9.748e-1730.65Dimethylaniline monooxygenase [N-oxide-forming] 1 ... [more]
FMO1_HUMAN4.096e-1529.15Dimethylaniline monooxygenase [N-oxide-forming] 1 ... [more]
FMO1_RABIT3.467e-1428.57Dimethylaniline monooxygenase [N-oxide-forming] 1 ... [more]
FMO1_MOUSE3.467e-1429.65Dimethylaniline monooxygenase [N-oxide-forming] 1 ... [more]
FMO1_RAT1.721e-1329.15Dimethylaniline monooxygenase [N-oxide-forming] 1 ... [more]
FMO1_CANFA2.247e-1328.14Dimethylaniline monooxygenase [N-oxide-forming] 1 ... [more]
FMO4_RAT5.007e-1326.00Dimethylaniline monooxygenase [N-oxide-forming] 4 ... [more]
FMO5_HUMAN8.540e-1326.87Dimethylaniline monooxygenase [N-oxide-forming] 5 ... [more]
FMO4_MOUSE1.457e-1226.00Dimethylaniline monooxygenase [N-oxide-forming] 4 ... [more]
FMO4_RABIT1.902e-1226.00Dimethylaniline monooxygenase [N-oxide-forming] 4 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-056-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663528 ID=EY663528; Name=EY663528; organism=Citrus sinensis; type=EST; length=942bp
ACTGGACGCCTGCGGTACCGGTCCGGATTCTTTCGTCAACCCCGCGTCCG
GATTGGAGTTTCCATATAACGTAAAGATTTTCAGTATATAAATTGAATAA
GCACCCCCCGACGGTCAATACCAATCAACTTAACTCAAAATTAACCTGAA
AAAGAAGAAGAAGAAGAAGAAATGAAAGAGCAAGCGGCGGGAGTAGAAGT
GATAATGGTAGGGGCAGGAACGTCCGGCCTGGCGACGGCGGCCTGCCTTA
GCCTTCAATCAATCCCTTACGTAATCCTCGAAAGAGAAAATTGTTACGCG
TCCATCTGGAAGAAATATTCCTACGATCGCCTACGTCTGCACTTAGCAAA
GCAATTTTGTCAGCTCCCTCACCTGCCATTCCCTTCTTCTTATCCGATGT
TTGTCTCCAGAGCCCAATTCATTGAACACTTGGATCACTACGTTTCCCAT
TTCAACATCGGTCCGTCAATACGGTACCAAAGATCGGTTGAATCGGCGAG
CTACGACGAGGCAACCAATATGTGGAACGTTAAGGCTAGCAACTTACTAA
GTCCCGGCCGTGAGATTGAGGAATATTATTCCGGGAGGTTTCTGGTGGTT
GCAAGTGGGGAAACGACCAACCCTTTTACGCCGGATATTCGAGGACTGTG
CTCTTTCTGCAGTAGTGCTACCGGGACTGGAGAAGTTATTCATTCCACTC
AGTATAAAAATGGGAAACCTTATGGCGGCAAGAATGTGTTGGTCGTTGGC
TCTGGAAATCTGGCATGGAAATTGCACTGGATCTAGCCAACCATGCCCGC
AAAACCTCTTTAGTTGTCCGTAGCCCGGTGGGTNATTCANTTATATTTCA
CTTGGCATGCACCTATTTTTTTTACCCTAGTTCTATATATCTATCTACTC
GNATAATAANTAATCAGGNTCATGTGCTGTCAAGGGAGATGG
back to top