EY663280

Overview
NameEY663280
Unique NameEY663280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7825 contig Csv1_Contig7825:1..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.141e-96
Identity = 165/221 (74.66%), Postives = 186/221 (84.16%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            V PGKF RE +LK G++M MPDI+DKMPKRSFLPR I SKLPFS+SKI ++K+IFHAGD S +E +I +AL +CERAPSAGETKRCV S EDMIDFATS+LG            GS   IMIGSVKGINGGKVTKSVSCHQ+L+PYLLYYCHSVPKVRVYEAD+LD N+K KINHGVAICH+DTS+W P+HGAF+ALGSGPGKIEVCHWIFENDMTW  AD
Sbjct:  410 VEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHWIFENDMTWAIAD 630          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.044e-94
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            + PGKF RE +LK G++M MPDI+DKMPKRSFLPR I +KLPFS+SKI ++K+IFHA ++S +  +I +AL +CERAPS GETK+CV S EDMIDFATS+LG            GSK  IMIGS+KGINGGKVTKSVSCHQ+L+P LLYYCHSVPKVRVYEAD+LD N+KAKINHGVAICH+DTS+W P HGAF+ALGSGPGKIEVCHWIFENDMTW TAD
Sbjct:  409 IEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTWATAD 629          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.181e-93
Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            + PGKF RE +LK G++M MPDI+DKMPKRSFLPR I +KLPFS+SKI ++K+IFHA ++S +  +I +AL +CERAPS GETK+CV S EDMIDFATS+LG            GSK  IMIGS+KGINGGKVTKSVSCHQ+L+P LLYYCHSVPKVRVYEAD+LD N+KAKINHGVAICH+DTS+W P HGAF+ALGSGPGKIEVCHWIFENDMTW TAD
Sbjct:  412 IEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTWATAD 632          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2)

HSP 1 Score: 337.806 bits (865), Expect = 4.963e-92
Identity = 156/221 (70.59%), Postives = 184/221 (83.26%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            V PGKF RES+LK+G+++ MPDI+DKMPKRSFLPR+IVSKLPFS+SKI ++K +FHA DNS+ME II +A+ +CER P+  ETKRCVGS EDMIDFATS+LG            GSK+K+MIG V GINGG+VTKSVSCHQSL+PYLLYYCHSVPKVRVYE+D+LD  +KAKINHG+AICH+DTSAW   HGAF+ LGS PG+IEVCHWIFENDM W  AD
Sbjct:  402 VEPGKFFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2)

HSP 1 Score: 336.65 bits (862), Expect = 1.106e-91
Identity = 154/221 (69.68%), Postives = 186/221 (84.16%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            + PGKF RES LK+G+V+ MPDI+DKMPKRSFLPR+I++KLPFS+SK+ ++K IFHA +NS+M  II +A+ +CER PS GETKRCVGS EDMIDFATS+LG            GSK+K++IG V GINGGK+TK+VSCHQSL+PYLLYYCHSVPKVRVYEAD+L+ N+K KINHG+AICH+DTS+W P+HGAFLALGS PG+IEVCHWIFENDM W  AD
Sbjct:  406 IEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 9.685e-88
Identity = 152/221 (68.78%), Postives = 177/221 (80.09%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            V  GKF RE++LK+G++M MPDI+DKMPKR+FLPR IV  LPFSSS I ++  +F AG+NSSM  II  A+ +CER  S GETKRCVGS EDMIDFATS+LG            GSKKK++IG V GINGG VT++VSCHQSL+PYLLYYCHSVP+VRVYE D+LD  +  KINHGVAICH+DTSAWSP+HGAFLALGSGPG+IEVCHWIFENDMTW   D
Sbjct:  404 VEEGKFFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.228e-74
Identity = 130/219 (59.36%), Postives = 161/219 (73.52%), Query Frame = 1
Query:   13 PGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            PGKF RE+ L  G+ M MPDI+DKMP R+FLPR I  K+PF  + +    E+F    +++M   +   + +CERAPS GETKRC  S ED++DFA  +LG            GS  +I +G+V G++GGKVT+SVSCHQSLFPYL+YYCHSVPKVRVYEAD++ A++  KINHGVAICHLDTS WSPTHGAF+ALG  PG++EVCHWIFE DMTWT AD
Sbjct:  412 PGKFFRETELVSGNTMPMPDIKDKMPPRAFLPRDIAKKIPFKPNAVS---EVFGVPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDFAVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVYEADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTWTVAD 627          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.361e-65
Identity = 118/223 (52.91%), Postives = 155/223 (69.51%), Query Frame = 1
Query:    7 VRPGKFSRESVLKKGSVMAMPDIQDKMP--KRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 669
            ++PG F RE  LK+G+V+ MPDI +++   + SFLPR+I  ++PF   K + +K +F    N+++   + E +  C+ +PS GETKRCV S EDMIDFA ++LG            G  + IMIG VKGINGGK+T SVSCH+ LFPY++YYCHSVPK+RVYEA++L   TK KIN GVAICH+DTSAW+  H AF+ALG  PG+ +VCHWIF   MTW  AD
Sbjct:  123 IKPGIFFREQELKEGNVVRMPDIANELTTARSSFLPRSIADRIPF---KAEAVKSLFGLEPNTTLAKAVDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDIVVRSTVLPNGPGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQTKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWVIAD 342          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.184e-57
Identity = 107/202 (52.97%), Postives = 134/202 (66.34%), Query Frame = 1
Query:   13 PGKFSRESVLKKGSVMAMPDIQDKMPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXGSKKKIMIGSVKGIN-GGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGK 615
            PGKF RE  L  G+ M MPDI D+ P R+FLPR I +K+PF ++ +     +F A   ++M  ++   + +C R PS GETKRC  S ED++DFA  +LG            G    + +G V G+  GG VT+SVSCHQSLFPYL+YYCHSVP VRVYEAD+L  ++  KINHGVAICHLDTS WSP HGAF+ALG  PGK
Sbjct:  474 PGKFFRERDLVAGNRMPMPDIADRTPPRAFLPRDIAAKIPFDAAAVS---ALFGAAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGK 672          
BLAST of EY663280 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.391e-24
Identity = 61/198 (30.81%), Postives = 97/198 (48.99%), Query Frame = 1
Query:   85 MPKRSFLPRTIVSKLPFSSSKIKDMKEIFHAGDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSILGXXXXXXXXXXXXG------SKKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWT 660
            M    FLPR     +PFSS  ++++   F     S   S++K  L +CE   + GE K C  S+E M+DF  S LG            G      +++  + G+ +    G++   ++CH   +PY ++ CH     R Y+A ++  +  A     VA+CH DT+ W+P H AF  LG  PG + VCH++  + + WT
Sbjct:  129 MAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQL---IACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAV--EAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVWT 321          
The following BLAST results are available for this feature:
BLAST of EY663280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GP1_SOLLC1.141e-9674.66Polygalacturonase-1 non-catalytic subunit beta OS=... [more]
GP2_SOLLC9.044e-9471.95Polygalacturonase non-catalytic subunit AroGP2 OS=... [more]
GP3_SOLLC1.181e-9371.95Polygalacturonase non-catalytic subunit AroGP3 OS=... [more]
JP630_ARATH4.963e-9270.59Probable polygalacturonase non-catalytic subunit J... [more]
JP650_ARATH1.106e-9169.68Probable polygalacturonase non-catalytic subunit J... [more]
Y639_ARATH9.685e-8868.78Probable polygalacturonase non-catalytic subunit A... [more]
BURPC_ORYSJ1.228e-7459.36BURP domain-containing protein 12 OS=Oryza sativa ... [more]
BURPG_ORYSJ1.361e-6552.91BURP domain-containing protein 16 OS=Oryza sativa ... [more]
BURPE_ORYSJ5.184e-5752.97BURP domain-containing protein 14 OS=Oryza sativa ... [more]
BURP5_ORYSJ3.391e-2430.81BURP domain-containing protein 5 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663280 ID=EY663280; Name=EY663280; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGGCCGGGCAAATTCTCTAGAGAGTCGGTGCTGAAGAAAGG
GAGCGTGATGGCAATGCCTGACATTCAAGATAAAATGCCCAAAAGGTCGT
TTCTGCCCCGCACTATTGTTTCGAAATTGCCGTTTTCCAGTTCTAAAATT
AAGGACATGAAGGAAATATTCCACGCTGGTGATAATTCGTCGATGGAGAG
TATAATTAAAGAGGCGTTGGGCGACTGCGAGAGGGCACCGAGCGCGGGCG
AGACCAAACGGTGCGTGGGCTCAGTGGAAGACATGATCGACTTTGCCACT
TCCATTTTGGGCCGCAATGTGGTGGTCCGTACAACCGAGAATGTGAATGG
GTCAAAGAAGAAGATCATGATCGGATCCGTCAAAGGAATCAACGGTGGTA
AAGTCACTAAATCAGTTTCTTGTCATCAAAGCTTGTTTCCTTATCTGCTT
TATTACTGCCACTCTGTTCCTAAAGTTCGCGTGTATGAAGCCGATGTCTT
GGATGCTAACACGAAAGCCAAGATCAATCACGGGGTTGCCATCTGTCACT
TGGATACCTCAGCTTGGAGCCCGACCCACGGAGCCTTCTTGGCTTTGGGT
TCGGGTCCTGGGAAGATCGAGGTTTGCCACTGGATTTTTGAGAATGATAT
GACTTGGACCACGGCTGATTAGCCATTTGGGTCAGGTCATGTGGACGTGG
GTTCAAGCCATTTGCTAAGATACTTAGCTGTGGGTCCAGCTCATGCTATC
CCATCTATATTATTCAGCCGATCGATGACGATAAGAAAAATAAAGGCTTA
TTTATTAGGGCTTGGTAATGGCATTTCATAAATATAATTTATATAAAATT
TCAATTGGGCACCAAAAAAAAAAAAAATAAAAAAAAAGGC
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