EY663277

Overview
NameEY663277
Unique NameEY663277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_PHOLL (Inner membrane protein alx OS=Photorhabdus luminescens subsp. laumondii GN=alx PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 2
Query:   14 HGNRFFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            HG RFF  + G+  ATP +  + ++E+SD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  188 HGERFFVKEKGLLYATPLILVLILVEISDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: Y319_MYXXA (Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 2
Query:    2 TAYYHGNRFFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILG 193
            T  + G+ FFT ++G + ATP L  + ++E SDI FA+DSIPA+F VT DPFIVF+SN+FAILG
Sbjct:  178 TPNFDGHHFFTVENGRKLATPLLMALLLVEASDILFALDSIPAIFAVTTDPFIVFTSNIFAILG 241          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_SHIFL (Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2
Query:   26 FFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            FF  ++G+  ATP +  + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  192 FFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_ECOLI (Inner membrane protein alx OS=Escherichia coli (strain K12) GN=alx PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2
Query:   26 FFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            FF  ++G+  ATP +  + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  192 FFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_ECOL6 (Inner membrane protein alx OS=Escherichia coli O6 GN=alx PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2
Query:   26 FFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            FF  ++G+  ATP +  + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  192 FFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_ECO57 (Inner membrane protein alx OS=Escherichia coli O157:H7 GN=alx PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2
Query:   26 FFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            FF  ++G+  ATP +  + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  192 FFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_SALTY (Inner membrane protein alx OS=Salmonella typhimurium GN=alx PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 2
Query:   26 FFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            FF  ++G+  ATP L  + ++E SD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  192 FFVRKNGLLYATPLLLVLIMVEFSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: ALX_SALTI (Inner membrane protein alx OS=Salmonella typhi GN=alx PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 2
Query:   26 FFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            FF  ++G+  ATP L  + ++E SD+ FAVDSIPA+F VT DPFIV +SNLFAILG   +Y
Sbjct:  192 FFVRKNGLLYATPLLLVLIMVEFSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMY 252          
BLAST of EY663277 vs. ExPASy Swiss-Prot
Match: Y156_BUCBP (Uncharacterized membrane protein bbp_156 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bbp_156 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 31/69 (44.93%), Postives = 49/69 (71.01%), Query Frame = 2
Query:    2 TAYYHGNRFFTNQDGMRKATPFLPTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGTIVVY 208
            T  +  N FFT ++G+  ATP    + +IEL+DI F++DSIPA+F +T+DPFI+ +S+ F+I+G   +Y
Sbjct:  187 TKNFSKNNFFTKENGVIVATPLFLVLILIELNDIIFSIDSIPAIFLITKDPFIIITSSFFSIIGLRSIY 255          
The following BLAST results are available for this feature:
BLAST of EY663277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ALX_PHOLL6.446e-1556.92Inner membrane protein alx OS=Photorhabdus lumines... [more]
Y319_MYXXA2.449e-1457.81Uncharacterized membrane protein STKORF319 OS=Myxo... [more]
ALX_SHIFL4.619e-1357.38Inner membrane protein alx OS=Shigella flexneri GN... [more]
ALX_ECOLI4.619e-1357.38Inner membrane protein alx OS=Escherichia coli (st... [more]
ALX_ECOL64.619e-1357.38Inner membrane protein alx OS=Escherichia coli O6 ... [more]
ALX_ECO574.619e-1357.38Inner membrane protein alx OS=Escherichia coli O15... [more]
ALX_SALTY7.880e-1357.38Inner membrane protein alx OS=Salmonella typhimuri... [more]
ALX_SALTI7.880e-1357.38Inner membrane protein alx OS=Salmonella typhi GN=... [more]
Y156_BUCBP1.138e-1144.93Uncharacterized membrane protein bbp_156 OS=Buchne... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663277 ID=EY663277; Name=EY663277; organism=Citrus sinensis; type=EST; length=893bp
TACAGCTTATTACCATGGAAATCGATTTTTCACAAATCAGGATGGCATGC
GGAAAGCAACACCATTTCTTCCCACGGTGGCAGTTATTGAACTCAGTGAC
ATAGCCTTCGCTGTTGACTCAATTCCTGCCGTTTTTGGTGTTACGAGGGA
TCCTTTCATAGTATTTTCATCTAATCTGTTTGCCATCTTGGGTACGATTG
TTGTTTATTCTTAATATAGGCTTTTTTTATGAAAGGATTCTTGATATAGA
CTCATAGCAACTCAAAACTGCTACTTATATATATGAAATTGATGATTGCC
TGCCTGGAAGGTGGAATTATTGGATCTCGTCCCCCCAACGACCCCCCCAA
AAAAAAATTCACTCACCCCATCCATGCATAAATACTAACTATAAAAATCC
CTATGTGGGGGTATTGATACTTTAACCTCTTGCAAGATGTTAAATCAACT
GGTTTTCCCCCTTGGAAAGGTAACAGTTGGAATAAAAATGTAATTTGGGT
AGCCCATTCACTTCCGATGTAAGAAACACTAATATGCTGTTTTCTTACAT
ACAACCATTTTCTATATATCTCTTTAATATAAAAGAATGTACTTATAATA
GTATAAAAGGAAATTGTATATCTTATTCAAGTAGGGATTAACTGACGATA
ACTCCGGCCAATGCAGGCTTAAGGTCACTTTTCACACTCATCTCTGAAGG
TATGGCAGACTTGGAATATTTACAGGTAAAAGTTTACTGGGTGTCTATAA
ATCTTCATTAGCCACATTAACAGATGATTTTGATGCAACTGGCGACACTC
TATCAGTAAATTGCAAAAAAATATAACTGGTACTTCCTGGATTACATCAC
GCTTTTGTGCTTCCAGAGTTGAATTTTCTTTTCCTCGCATCCA
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